RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 RUFY2Q8WXA3 655 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 PPM1EQ8WY54 764 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 BPIFA3Q9BQP9 254 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 FRMD4BQ9Y2L6 1034 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 URI1O94763 535 aaPredicted RBP12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 GSCP56915 257 aaPredicted RBP12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 JAKMIP3Q5VZ66 844 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 RABGGTAQ92696 567 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 MAP3K5Q99683 1374 aa12.1□□□□□ -0.47
SUPT16H-207ENST00000557394 CCDC151A5D8V7 595 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 ANKRD1Q15327 319 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 FCHSD1Q86WN1 690 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 ENGASEQ8NFI3 743 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 MPHOSPH8Q99549 860 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 PARD6BQ9BYG5 372 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 NAT10Q9H0A0 1025 aaKnown RBP12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 MKRN1Q9UHC7 482 aaKnown RBP12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 CFAP45Q9UL16 551 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 SMC2O95347 1197 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 POLA2Q14181 598 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 LONRF2Q1L5Z9 754 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 TMC6Q7Z403 805 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 RHPN1Q8TCX5 695 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 KCNV2Q8TDN2 545 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 DRC1Q96MC2 740 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 XPO4Q9C0E2 1151 aaKnown RBP12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 GOLPH3LQ9H4A5 285 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 DEF6Q9H4E7 631 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 RCOR1Q9UKL0 485 aa12.09□□□□□ -0.47
SUPT16H-207ENST00000557394 ZC3H4Q9UPT8 1303 aaKnown RBP12.08□□□□□ -0.47
SUPT16H-207ENST00000557394 NRKQ7Z2Y5 1582 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 RGL2O15211 777 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 ADD1P35611 737 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 BRD3Q15059 726 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 CT47A1Q5JQC4 288 aaPredicted RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 PROSER2Q86WR7 435 aaPredicted RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 CCAR1Q8IX12 1150 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 HNRNPLLQ8WVV9 542 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 RBM28Q9NW13 759 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 ANKARQ7Z5J8 1434 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 ZKSCAN1P17029 563 aaPredicted RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 PSMA5P28066 241 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 APOBRQ0VD83 1088 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 CREB3L3Q68CJ9 461 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 ITFG2Q969R8 447 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 NUDT16Q96DE0 195 aaKnown RBP12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 MRFAP1Q9Y605 127 aa12.08□□□□□ -0.48
SUPT16H-207ENST00000557394 PXDNLA1KZ92 1463 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 MCTP2Q6DN12 878 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 MAMSTRQ6ZN01 415 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 CCDC91Q7Z6B0 441 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 CEP89Q96ST8 783 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 TOMM22Q9NS69 142 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 IFNKQ9P0W0 207 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 XIRP1Q702N8 1843 aaKnown RBP12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
SUPT16H-207ENST00000557394 CCDC172P0C7W6 258 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 FAM160A1Q05DH4 1040 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 PPP2R3AQ06190 1150 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 TOB2Q14106 344 aaPredicted RBP12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 FOXR1Q6PIV2 292 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 MMS22LQ6ZRQ5 1243 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 MCM10Q7L590 875 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 A0A087WWV3 80 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 VWA3AA6NCI4 1184 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 GLRX3O76003 335 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 TXLNAP40222 546 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 TDO2P48775 406 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 MAP4K1Q92918 833 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 SNRKQ9NRH2 765 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 PRR36Q9H6K5 1346 aa12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 EDC4Q6P2E9 1401 aaKnown RBP12.06□□□□□ -0.48
SUPT16H-207ENST00000557394 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 KINO60870 393 aaKnown RBP12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 USP5P45974 858 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 CCDC73Q6ZRK6 1079 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 GOLGA1Q92805 767 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 USP44Q9H0E7 712 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 SLC24A3Q9HC58 644 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 MON2Q7Z3U7 1717 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 RPS6KB1P23443 525 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 FLIIQ13045 1269 aa12.05□□□□□ -0.48
SUPT16H-207ENST00000557394 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms