RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, human

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN21-209	ENST00000557249	COL26A1	Q96A83	441 aa		4.24	□□□□□ -1.73
PTPN21-209	ENST00000557249	MKNK1	Q9BUB5	465 aa		4.24	□□□□□ -1.73
PTPN21-209	ENST00000557249	USP26	Q9BXU7	913 aa		4.24	□□□□□ -1.73
PTPN21-209	ENST00000557249	ELP3	Q9H9T3	547 aa		4.24	□□□□□ -1.73
PTPN21-209	ENST00000557249	BSDC1	Q9NW68	430 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN21-209	ENST00000557249	ACIN1	Q9UKV3	1341 aa	Known RBP	4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	PDE2A	O00408	941 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	PRNP	P04156	253 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	PCSK2	P16519	638 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	CES1	P23141	567 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	IKBKE	Q14164	716 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	NAA30	Q147X3	362 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	MSMP	Q1L6U9	139 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	DUSP27	Q5VZP5	1158 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	TBC1D32	Q96NH3	1257 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	STIM2	Q9P246	746 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	KANSL3	Q9P2N6	904 aa		4.23	□□□□□ -1.73
PTPN21-209	ENST00000557249	BIN1	O00499	593 aa		4.22	□□□□□ -1.73
PTPN21-209	ENST00000557249	ADAMTSL4	Q6UY14	1074 aa		4.22	□□□□□ -1.73
PTPN21-209	ENST00000557249	CBLL1	Q75N03	491 aa		4.22	□□□□□ -1.73
PTPN21-209	ENST00000557249	C14orf37	Q86TY3	774 aa		4.22	□□□□□ -1.73
PTPN21-209	ENST00000557249	SMG8	Q8ND04	991 aa	Known RBP	4.22	□□□□□ -1.73
PTPN21-209	ENST00000557249	FBLIM1	Q8WUP2	373 aa		4.22	□□□□□ -1.73
PTPN21-209	ENST00000557249	TNFRSF10B	O14763	440 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	EIF4EBP3	O60516	100 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	ITGB5	P18084	799 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	CYP27A1	Q02318	531 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	PKN1	Q16512	942 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	FAM26D	Q5JW98	314 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	PMEPA1	Q969W9	287 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	NUDT16	Q96DE0	195 aa	Known RBP	4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	TMPRSS13	Q9BYE2	586 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	SUGCT	Q9HAC7	445 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	DZANK1	Q9NVP4	752 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	TMEM63C	Q9P1W3	806 aa		4.21	□□□□□ -1.74
PTPN21-209	ENST00000557249	DRD2	P14416	443 aa		4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	OCLN	Q16625	522 aa		4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	EXOSC6	Q5RKV6	272 aa	Known RBP	4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	ZAR1	Q86SH2	424 aa		4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	BSND	Q8WZ55	320 aa		4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	LRRC4C	Q9HCJ2	640 aa		4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	SALL4	Q9UJQ4	1053 aa		4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	SOX13	Q9UN79	622 aa		4.2	□□□□□ -1.74
PTPN21-209	ENST00000557249	LOC100289279	A0A1B0GTE1	492 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	SOX1	O00570	391 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	ZBTB39	O15060	712 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	TIAF1	O95411	115 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	MAP7	Q14244	749 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	C8orf34	Q49A92	452 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	CFAP70	Q5T0N1	1121 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	CDPF1	Q6NVV7	123 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	C1orf127	Q8N9H9	656 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	TMEM102	Q8N9M5	508 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	CNTN3	Q9P232	1028 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	PRKAG2	Q9UGJ0	569 aa		4.19	□□□□□ -1.74
PTPN21-209	ENST00000557249	FAM170B	A6NMN3	283 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	NFKBIE	O00221	500 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	TRPA1	O75762	1119 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	ACPP	P15309	386 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	ADM	P35318	185 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	GSTM4	Q03013	218 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	SOX4	Q06945	474 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	PLCL1	Q15111	1095 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	ZNF648	Q5T619	568 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	HGSNAT	Q68CP4	663 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	CAPN12	Q6ZSI9	719 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	STK11IP	Q8N1F8	1099 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	ASAP3	Q8TDY4	903 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	OSMR	Q99650	979 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	SOX17	Q9H6I2	414 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	PAK6	Q9NQU5	681 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	SLC5A6	Q9Y289	635 aa		4.18	□□□□□ -1.74
PTPN21-209	ENST00000557249	DBX1	A6NMT0	343 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	FARP2	O94887	1054 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	EDN3	P14138	238 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	RAB6A	P20340	208 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	DNM1	Q05193	864 aa	Known RBP	4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	ELOA	Q14241	798 aa	Known RBP	4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	XKR5	Q6UX68	686 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	KSR1	Q8IVT5	923 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	SHISA5	Q8N114	240 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	EDEM1	Q92611	657 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	NXPE3	Q969Y0	559 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	HHIP	Q96QV1	700 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	SLC38A3	Q99624	504 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	KRTAP4-9	Q9BYQ8	210 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	ZFYVE1	Q9HBF4	777 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	RAD18	Q9NS91	495 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	PODXL2	Q9NZ53	605 aa		4.17	□□□□□ -1.74
PTPN21-209	ENST00000557249	NFIC	P08651	508 aa		4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	RANGAP1	P46060	587 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	ZNF124	Q15973	351 aa		4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	NFXL1	Q6ZNB6	911 aa		4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	DYM	Q7RTS9	669 aa		4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	ATCAY	Q86WG3	371 aa		4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	STK32A	Q8WU08	396 aa		4.16	□□□□□ -1.74
PTPN21-209	ENST00000557249	EZH1	Q92800	747 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms