RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
ATXN3-244ENST00000556898 FIGNL2A6NMB9 653 aa6.85□□□□□ -1.31
ATXN3-244ENST00000556898 BTBD11A6QL63 1104 aa6.85□□□□□ -1.31
ATXN3-244ENST00000556898 UPP2O95045 317 aa6.85□□□□□ -1.31
ATXN3-244ENST00000556898 CABP4P57796 275 aa6.85□□□□□ -1.31
ATXN3-244ENST00000556898 MYH16Q9H6N6 1097 aa6.85□□□□□ -1.31
ATXN3-244ENST00000556898 PAPPAQ13219 1627 aa6.85□□□□□ -1.31
ATXN3-244ENST00000556898 PLEKHG2Q9H7P9 1386 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 BCAR3O75815 825 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 HSP90AB1P08238 724 aaKnown RBP6.84□□□□□ -1.31
ATXN3-244ENST00000556898 PTSQ03393 145 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 CALD1Q05682 793 aaKnown RBP6.84□□□□□ -1.31
ATXN3-244ENST00000556898 CTDSPL2Q05D32 466 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 KCNMA1Q12791 1236 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 ERFEQ4G0M1 354 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 COL13A1Q5TAT6 717 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-244ENST00000556898 CCDC116Q8IYX3 515 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 ARMC2Q8NEN0 867 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 PIGBQ92521 554 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 KLRG1Q96E93 195 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 TSEN34Q9BSV6 310 aaKnown RBP6.84□□□□□ -1.31
ATXN3-244ENST00000556898 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
ATXN3-244ENST00000556898 SCN11AQ9UI33 1791 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 MRC1P22897 1456 aa6.84□□□□□ -1.31
ATXN3-244ENST00000556898 NHSQ6T4R5 1651 aa6.84□□□□□ -1.32
ATXN3-244ENST00000556898 SIPA1L3O60292 1781 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 TTLL8A6PVC2 850 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 ERVV-2B6SEH9 535 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 PLIN1O60240 522 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 VAMP4O75379 141 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 PRELPP51888 382 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 EIF4A1P60842 406 aaKnown RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 IRX6P78412 446 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 TWISTNBQ3B726 338 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 TMEM259Q4ZIN3 620 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 PPP1R26Q5T8A7 1209 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 KCTD17Q8N5Z5 321 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 JMYQ8N9B5 988 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 HELBQ8NG08 1087 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 SMARCC1Q92922 1105 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 ATG3Q9NT62 314 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 TMOD3Q9NYL9 352 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 WWC3Q9ULE0 1092 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 ASAP1Q9ULH1 1129 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 TNNQ9UQP3 1299 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 DOT1LQ8TEK3 1739 aa6.83□□□□□ -1.32
ATXN3-244ENST00000556898 VIRMAQ69YN4 1812 aaKnown RBP6.83□□□□□ -1.32
ATXN3-244ENST00000556898 KDM3BQ7LBC6 1761 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 ANXA1P04083 346 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 TGFB2P61812 414 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 FSTL1Q12841 308 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 RNFT1Q5M7Z0 435 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 ZNF790Q6PG37 636 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 Q6ZVU0 165 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 BANK1Q8NDB2 785 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 SSH1Q8WYL5 1049 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 ZNF496Q96IT1 587 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-244ENST00000556898 SLC4A9Q96Q91 983 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 RCAN3Q9UKA8 241 aa6.82□□□□□ -1.32
ATXN3-244ENST00000556898 KCPQ6ZWJ8 1503 aa6.81□□□□□ -1.32
ATXN3-244ENST00000556898 PTCD1O75127 700 aaKnown RBP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 EIF2S2P20042 333 aaKnown RBP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 SSFA2P28290 1259 aa6.81□□□□□ -1.32
ATXN3-244ENST00000556898 PIP4K2AP48426 406 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 RARSP54136 660 aaKnown RBP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 SUZ12Q15022 739 aaKnown RBP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 ARHGAP27Q6ZUM4 889 aa6.81□□□□□ -1.32
ATXN3-244ENST00000556898 G2E3Q7L622 706 aa6.81□□□□□ -1.32
ATXN3-244ENST00000556898 C16orf71Q8IYS4 520 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 GPKOWQ92917 476 aaPredicted RBP eCLIP6.81□□□□□ -1.32
ATXN3-244ENST00000556898 OCSTAMPQ9BR26 566 aa6.81□□□□□ -1.32
ATXN3-244ENST00000556898 NMRK2Q9NPI5 230 aa6.81□□□□□ -1.32
ATXN3-244ENST00000556898 SPINT1O43278 529 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 PROSER3Q2NL68 480 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 DNAJC10Q8IXB1 793 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 TTC5Q8N0Z6 440 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 LRRN4Q8WUT4 740 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 AGBL1Q96MI9 1066 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 COL25A1Q9BXS0 654 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-244ENST00000556898 BABAM1Q9NWV8 329 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 BCS1LQ9Y276 419 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 USP16Q9Y5T5 823 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 ITGB4P16144 1822 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 C5P01031 1676 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 PALLDQ8WX93 1383 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 HEG1Q9ULI3 1381 aa6.8□□□□□ -1.32
ATXN3-244ENST00000556898 A0A0G2JLW4 131 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 USP17L8P0C7I0 530 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 RRP1P56182 461 aaKnown RBP6.79□□□□□ -1.32
ATXN3-244ENST00000556898 HTRA3P83110 453 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 C20orf194Q5TEA3 1177 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
ATXN3-244ENST00000556898 WHAMMQ8TF30 809 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms