RNA–Protein interactions for RNA: ENST00000556890.1

AL390334.1-204, humanhuman

TSL 1 (best)

Gene AL390334.1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390334.1-204ENST00000556890 PRICKLE2Q7Z3G6 844 aa9.04□□□□□ -0.96
AL390334.1-204ENST00000556890 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
AL390334.1-204ENST00000556890 IGSF1Q8N6C5 1336 aa9.04□□□□□ -0.96
AL390334.1-204ENST00000556890 LOC102724428A0A0B4J2F2 783 aa9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 HSP90AB1P08238 724 aaKnown RBP9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 SIK1P57059 783 aa9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 ERVK-9P63128 1117 aa9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 FOXR1Q6PIV2 292 aa9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
AL390334.1-204ENST00000556890 TJP1Q07157 1748 aa9.02□□□□□ -0.96
AL390334.1-204ENST00000556890 LOC100996750A0A140TA64 210 aa9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 MAP3K10Q02779 954 aa9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 GAS6Q14393 721 aa9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 PLEKHO1Q53GL0 409 aaPredicted RBP9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 ZNF530Q6P9A1 599 aaPredicted RBP9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 NLGN2Q8NFZ4 835 aa9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 KRTAP4-6Q9BYQ5 205 aa9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 ZNF330Q9Y3S2 320 aaPredicted RBP9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 BRCA1P38398 1863 aaKnown RBP9.02□□□□□ -0.97
AL390334.1-204ENST00000556890 A0A1W2PRU2 124 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 MEN1O00255 615 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 RHOQP17081 205 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 SUZ12Q15022 739 aaKnown RBP9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 AMOTQ4VCS5 1084 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 C1orf141Q5JVX7 400 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 LYPD4Q6UWN0 246 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 LINC00116Q8NCU8 138 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 ZNF837Q96EG3 531 aaPredicted RBP9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 DCAF5Q96JK2 942 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 ENAMQ9NRM1 1142 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 ASAP1Q9ULH1 1129 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 DYRK1BQ9Y463 629 aa9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 DNMT3AQ9Y6K1 912 aaPredicted RBP9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 CICQ96RK0 1608 aaPredicted RBP9.01□□□□□ -0.97
AL390334.1-204ENST00000556890 ERVV-2B6SEH9 535 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 H7C1W4 665 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 SSFA2P28290 1259 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 IRS1P35568 1242 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 CABP4P57796 275 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 NR1H3Q13133 447 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 WDR44Q5JSH3 913 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 NLRP3Q96P20 1036 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 MBIPQ9NS73 344 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 ARFGEF1Q9Y6D6 1849 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 KIF7Q2M1P5 1343 aa9□□□□□ -0.97
AL390334.1-204ENST00000556890 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 GRIN3BO60391 1043 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 IGHA1P01876 353 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 CELA2BP08218 269 aaPredicted RBP8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 MTHFSP49914 203 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 ITPK1Q13572 414 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 SULT6B1Q6IMI4 303 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 AEBP1Q8IUX7 1158 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 BANK1Q8NDB2 785 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 KIAA1551Q9HCM1 1747 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 UBR2Q8IWV8 1755 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 KDRP35968 1356 aa8.99□□□□□ -0.97
AL390334.1-204ENST00000556890 AFDNP55196 1824 aaKnown RBP8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 CCDC88AQ3V6T2 1871 aa8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 FOXK2Q01167 660 aa8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 CLN3Q13286 438 aa8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 CC2D1BQ5T0F9 858 aaKnown RBP8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 SMIM5Q71RC9 77 aa8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 AMIGO3Q86WK7 504 aa8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 GRIP2Q9C0E4 1043 aa8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 RTCBQ9Y3I0 505 aaKnown RBP8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 CD2APQ9Y5K6 639 aa8.98□□□□□ -0.97
AL390334.1-204ENST00000556890 SPATA31C2B4DYI2 1134 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 YBX3P16989 372 aaKnown RBP eCLIP8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 IL13P35225 146 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 CNGB1Q14028 1251 aaPredicted RBP8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 NEUROD2Q15784 382 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 DBN1Q16643 649 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 RIPOR1Q6ZS17 1223 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 IL27Q8NEV9 243 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 CACNA1SQ13698 1873 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 DLG5Q8TDM6 1919 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 ADAMTS7Q9UKP4 1686 aa8.97□□□□□ -0.97
AL390334.1-204ENST00000556890 APBB1O00213 710 aa8.96□□□□□ -0.98
AL390334.1-204ENST00000556890 PTCD1O75127 700 aaKnown RBP8.96□□□□□ -0.98
AL390334.1-204ENST00000556890 POU4F2Q12837 409 aa8.96□□□□□ -0.98
AL390334.1-204ENST00000556890 TRAPPC3LQ5T215 181 aa8.96□□□□□ -0.98
AL390334.1-204ENST00000556890 NFATC2IPQ8NCF5 419 aa8.96□□□□□ -0.98
AL390334.1-204ENST00000556890 TRERF1Q96PN7 1200 aa8.96□□□□□ -0.98
AL390334.1-204ENST00000556890 TRAK2O60296 914 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 DIAPH1O60610 1272 aaKnown RBP8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 HMOX1P09601 288 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 RFC4P35249 363 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 AKAP4Q5JQC9 854 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 NBPF15Q8N660 670 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 PCDHB11Q9Y5F2 797 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 CNTNAP4Q9C0A0 1308 aa8.95□□□□□ -0.98
AL390334.1-204ENST00000556890 SBF1O95248 1867 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms