RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 CCDC7Q96M83 1385 aa8.2□□□□□ -1.1
TMEM260-212ENST00000556810 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 C1QTNF9BB2RNN3 333 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 ADAM23O75077 832 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 ADH7P40394 386 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 TMF1P82094 1093 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 CD163Q86VB7 1156 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 IFT172Q9UG01 1749 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 NOS1P29475 1434 aa8.19□□□□□ -1.1
TMEM260-212ENST00000556810 M0R082 166 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 CHRNA4P43681 627 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 CFAP70Q5T0N1 1121 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 IER5Q5VY09 327 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 ZNF417Q8TAU3 575 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 BHMTQ93088 406 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 ZNF587Q96SQ5 575 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-212ENST00000556810 RGS17Q9UGC6 210 aaPredicted RBP8.18□□□□□ -1.1
TMEM260-212ENST00000556810 STARD13Q9Y3M8 1113 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 WASHC2AQ641Q2 1341 aa8.18□□□□□ -1.1
TMEM260-212ENST00000556810 KTN1Q86UP2 1357 aaKnown RBP8.18□□□□□ -1.1
TMEM260-212ENST00000556810 PPLO60437 1756 aa8.17□□□□□ -1.1
TMEM260-212ENST00000556810 ST20-MTHFSA0A0A6YYL1 179 aa8.17□□□□□ -1.1
TMEM260-212ENST00000556810 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
TMEM260-212ENST00000556810 TGFBR3LH3BV60 316 aa8.17□□□□□ -1.1
TMEM260-212ENST00000556810 ADGRB3O60242 1522 aa8.17□□□□□ -1.1
TMEM260-212ENST00000556810 PIK3C2BO00750 1634 aa8.17□□□□□ -1.1
TMEM260-212ENST00000556810 ALBP02768 609 aa8.16□□□□□ -1.1
TMEM260-212ENST00000556810 SPATA31C1P0DKV0 1188 aa8.16□□□□□ -1.1
TMEM260-212ENST00000556810 LTKP29376 864 aa8.16□□□□□ -1.1
TMEM260-212ENST00000556810 TXNDC2Q86VQ3 553 aa8.16□□□□□ -1.1
TMEM260-212ENST00000556810 SCAF11Q99590 1463 aaKnown RBP8.16□□□□□ -1.1
TMEM260-212ENST00000556810 PRDM6Q9NQX0 595 aa8.16□□□□□ -1.1
TMEM260-212ENST00000556810 SETBP1Q9Y6X0 1596 aa8.16□□□□□ -1.1
TMEM260-212ENST00000556810 ZFYVE9O95405 1425 aa8.15□□□□□ -1.1
TMEM260-212ENST00000556810 KIF7Q2M1P5 1343 aa8.15□□□□□ -1.1
TMEM260-212ENST00000556810 K7ELQ4 463 aaPredicted RBP8.15□□□□□ -1.1
TMEM260-212ENST00000556810 COL9A3Q14050 684 aaPredicted RBP8.15□□□□□ -1.1
TMEM260-212ENST00000556810 MICALL1Q8N3F8 863 aa8.15□□□□□ -1.1
TMEM260-212ENST00000556810 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.15□□□□□ -1.1
TMEM260-212ENST00000556810 BCS1LQ9Y276 419 aa8.15□□□□□ -1.1
TMEM260-212ENST00000556810 XIRP1Q702N8 1843 aaKnown RBP8.15□□□□□ -1.11
TMEM260-212ENST00000556810 UBR1Q8IWV7 1749 aa8.15□□□□□ -1.11
TMEM260-212ENST00000556810 ERVK-7P63135 1459 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 FOXO3O43524 673 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 WEE1P30291 646 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 TBC1D8BQ0IIM8 1120 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 PRRT3Q5FWE3 981 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 C8orf86Q6ZUL3 223 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 UBE2OQ9C0C9 1292 aaKnown RBP8.14□□□□□ -1.11
TMEM260-212ENST00000556810 EFCC1Q9HA90 598 aa8.14□□□□□ -1.11
TMEM260-212ENST00000556810 DMGDHQ9UI17 866 aaKnown RBP8.14□□□□□ -1.11
TMEM260-212ENST00000556810 NRXN1Q9ULB1 1477 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 FURINP09958 794 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 IDI1Q13907 227 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 C20orf204Q6ZNR8 217 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 VTI1AQ96AJ9 217 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 GSX2Q9BZM3 304 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 KLK14Q9P0G3 267 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 KDM5AP29375 1690 aaKnown RBP8.13□□□□□ -1.11
TMEM260-212ENST00000556810 SYNMO15061 1565 aa8.13□□□□□ -1.11
TMEM260-212ENST00000556810 EPB42P16452 691 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 RFX1P22670 979 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 DGKZQ13574 1117 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 CCINQ13939 588 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 RALBP1Q15311 655 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 PNMA5Q96PV4 448 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 POLR3GLQ9BT43 218 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 IGFLR1Q9H665 355 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 C14orf93Q9H972 538 aaKnown RBP8.12□□□□□ -1.11
TMEM260-212ENST00000556810 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
TMEM260-212ENST00000556810 SLC6A14Q9UN76 642 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.12□□□□□ -1.11
TMEM260-212ENST00000556810 EID1Q9Y6B2 187 aa8.12□□□□□ -1.11
TMEM260-212ENST00000556810 NID1P14543 1247 aa8.11□□□□□ -1.11
TMEM260-212ENST00000556810 IDH3AP50213 366 aa8.11□□□□□ -1.11
TMEM260-212ENST00000556810 PUS7Q96PZ0 661 aaKnown RBP8.11□□□□□ -1.11
TMEM260-212ENST00000556810 ARHGAP23Q9P227 1491 aa8.11□□□□□ -1.11
TMEM260-212ENST00000556810 TMEM131LA2VDJ0 1609 aa8.11□□□□□ -1.11
TMEM260-212ENST00000556810 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 SLIT1O75093 1534 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 LILRB5O75023 590 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 NFKB1P19838 968 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 GRNP28799 593 aaKnown RBP8.1□□□□□ -1.11
TMEM260-212ENST00000556810 INPP5BP32019 993 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 MYO19Q96H55 970 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 YTHDC1Q96MU7 727 aaKnown RBP8.1□□□□□ -1.11
TMEM260-212ENST00000556810 ARID3AQ99856 593 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 PRKRIP1Q9H875 184 aaPredicted RBP8.1□□□□□ -1.11
TMEM260-212ENST00000556810 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
TMEM260-212ENST00000556810 NOVA2Q9UNW9 492 aaKnown RBP8.1□□□□□ -1.11
TMEM260-212ENST00000556810 PIK3C2GO75747 1445 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 FAM135BQ49AJ0 1406 aa8.1□□□□□ -1.11
TMEM260-212ENST00000556810 NEXMIFQ5QGS0 1516 aa8.09□□□□□ -1.11
TMEM260-212ENST00000556810 MYO5BQ9ULV0 1848 aa8.09□□□□□ -1.11
TMEM260-212ENST00000556810 APBA3O96018 575 aa8.09□□□□□ -1.11
TMEM260-212ENST00000556810 KCNA6P17658 529 aa8.09□□□□□ -1.11
TMEM260-212ENST00000556810 GATA4P43694 442 aa8.09□□□□□ -1.11
TMEM260-212ENST00000556810 ARSDP51689 593 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms