RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 CHRDQ9H2X0 955 aa8.05□□□□□ -1.12
PRPF39-210ENST00000556718 DNM1Q05193 864 aaKnown RBP8.04□□□□□ -1.12
PRPF39-210ENST00000556718 SHISA5Q8N114 240 aa8.04□□□□□ -1.12
PRPF39-210ENST00000556718 ADGRE2Q9UHX3 823 aa8.04□□□□□ -1.12
PRPF39-210ENST00000556718 GAS2O43903 313 aaKnown RBP8.03□□□□□ -1.12
PRPF39-210ENST00000556718 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
PRPF39-210ENST00000556718 MAP4P27816 1152 aaKnown RBP8.03□□□□□ -1.12
PRPF39-210ENST00000556718 XKR5Q6UX68 686 aa8.03□□□□□ -1.12
PRPF39-210ENST00000556718 HIF3AQ9Y2N7 669 aa8.03□□□□□ -1.12
PRPF39-210ENST00000556718 MEGF11A6BM72 1044 aa8.02□□□□□ -1.13
PRPF39-210ENST00000556718 SOX1O00570 391 aaPredicted RBP8.02□□□□□ -1.13
PRPF39-210ENST00000556718 DLGAP3O95886 979 aa8.02□□□□□ -1.13
PRPF39-210ENST00000556718 PDGFAP04085 211 aa8.02□□□□□ -1.13
PRPF39-210ENST00000556718 F13BP05160 661 aa8.02□□□□□ -1.13
PRPF39-210ENST00000556718 YBX3P16989 372 aaKnown RBP eCLIP8.02□□□□□ -1.13
PRPF39-210ENST00000556718 C19orf57Q0VDD7 668 aa8.02□□□□□ -1.13
PRPF39-210ENST00000556718 C8orf34Q49A92 452 aa8.01□□□□□ -1.13
PRPF39-210ENST00000556718 VN1R5Q7Z5H4 357 aa8.01□□□□□ -1.13
PRPF39-210ENST00000556718 ABI1Q8IZP0 508 aa8.01□□□□□ -1.13
PRPF39-210ENST00000556718 FBXL6Q8N531 539 aa8.01□□□□□ -1.13
PRPF39-210ENST00000556718 NXPE3Q969Y0 559 aa8.01□□□□□ -1.13
PRPF39-210ENST00000556718 PIM2Q9P1W9 311 aa8.01□□□□□ -1.13
PRPF39-210ENST00000556718 RXRBP28702 533 aa8□□□□□ -1.13
PRPF39-210ENST00000556718 ARL4DP49703 201 aa8□□□□□ -1.13
PRPF39-210ENST00000556718 TMEM102Q8N9M5 508 aaPredicted RBP8□□□□□ -1.13
PRPF39-210ENST00000556718 C12orf50Q8NA57 414 aaPredicted RBP8□□□□□ -1.13
PRPF39-210ENST00000556718 HELQQ8TDG4 1101 aa8□□□□□ -1.13
PRPF39-210ENST00000556718 OSMRQ99650 979 aa8□□□□□ -1.13
PRPF39-210ENST00000556718 ZKSCAN3Q9BRR0 538 aa8□□□□□ -1.13
PRPF39-210ENST00000556718 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
PRPF39-210ENST00000556718 EREGO14944 169 aa7.99□□□□□ -1.13
PRPF39-210ENST00000556718 TIAF1O95411 115 aa7.99□□□□□ -1.13
PRPF39-210ENST00000556718 RPLP1P05386 114 aaKnown RBP7.99□□□□□ -1.13
PRPF39-210ENST00000556718 USP26Q9BXU7 913 aa7.99□□□□□ -1.13
PRPF39-210ENST00000556718 LOC100289279A0A1B0GTE1 492 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 DRD2P14416 443 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 MPSTP25325 297 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 IKBKEQ14164 716 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 MSMPQ1L6U9 139 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 NOM1Q5C9Z4 860 aaKnown RBP7.98□□□□□ -1.13
PRPF39-210ENST00000556718 NUTM2GQ5VZR2 741 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 NFXL1Q6ZNB6 911 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 SMG8Q8ND04 991 aaKnown RBP7.98□□□□□ -1.13
PRPF39-210ENST00000556718 BSNDQ8WZ55 320 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 ATG3Q9NT62 314 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 LEMD3Q9Y2U8 911 aa7.98□□□□□ -1.13
PRPF39-210ENST00000556718 MZF1P28698 734 aaPredicted RBP7.97□□□□□ -1.13
PRPF39-210ENST00000556718 EIF1AXP47813 144 aaKnown RBP7.97□□□□□ -1.13
PRPF39-210ENST00000556718 CDPF1Q6NVV7 123 aa7.97□□□□□ -1.13
PRPF39-210ENST00000556718 FBLIM1Q8WUP2 373 aa7.97□□□□□ -1.13
PRPF39-210ENST00000556718 PBXIP1Q96AQ6 731 aa7.97□□□□□ -1.13
PRPF39-210ENST00000556718 ARID3AQ99856 593 aa7.97□□□□□ -1.13
PRPF39-210ENST00000556718 FOSL1P15407 271 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 PCSK2P16519 638 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 MTMR3Q13615 1198 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 NFKBIBQ15653 356 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 OSBPL1AQ9BXW6 950 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 SUGCTQ9HAC7 445 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 LATS2Q9NRM7 1088 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 POLIQ9UNA4 740 aa7.96□□□□□ -1.14
PRPF39-210ENST00000556718 FAM95CA0A1B0GW59 222 aa7.95□□□□□ -1.14
PRPF39-210ENST00000556718 ADMP35318 185 aa7.95□□□□□ -1.14
PRPF39-210ENST00000556718 ASAP3Q8TDY4 903 aa7.95□□□□□ -1.14
PRPF39-210ENST00000556718 PMEPA1Q969W9 287 aa7.95□□□□□ -1.14
PRPF39-210ENST00000556718 CYP4F12Q9HCS2 524 aa7.95□□□□□ -1.14
PRPF39-210ENST00000556718 CCDC39Q9UFE4 941 aa7.95□□□□□ -1.14
PRPF39-210ENST00000556718 FOXD3Q9UJU5 478 aaPredicted RBP7.95□□□□□ -1.14
PRPF39-210ENST00000556718 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
PRPF39-210ENST00000556718 TNFRSF21O75509 655 aa7.94□□□□□ -1.14
PRPF39-210ENST00000556718 ESRRAP11474 423 aaPredicted RBP7.94□□□□□ -1.14
PRPF39-210ENST00000556718 C2CD4AQ8NCU7 369 aaPredicted RBP7.94□□□□□ -1.14
PRPF39-210ENST00000556718 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
PRPF39-210ENST00000556718 GTF3C2Q8WUA4 911 aaPredicted RBP7.94□□□□□ -1.14
PRPF39-210ENST00000556718 ANGEL1Q9UNK9 670 aaKnown RBP7.94□□□□□ -1.14
PRPF39-210ENST00000556718 PHACTR2O75167 634 aa7.93□□□□□ -1.14
PRPF39-210ENST00000556718 USP11P51784 963 aa7.93□□□□□ -1.14
PRPF39-210ENST00000556718 COL19A1Q14993 1142 aa7.93□□□□□ -1.14
PRPF39-210ENST00000556718 EXOSC6Q5RKV6 272 aaKnown RBP7.93□□□□□ -1.14
PRPF39-210ENST00000556718 PEAR1Q5VY43 1037 aaPredicted RBP7.93□□□□□ -1.14
PRPF39-210ENST00000556718 TTC16Q8NEE8 873 aa7.93□□□□□ -1.14
PRPF39-210ENST00000556718 ARID3CA6NKF2 412 aa7.92□□□□□ -1.14
PRPF39-210ENST00000556718 PRNPP04156 253 aa7.92□□□□□ -1.14
PRPF39-210ENST00000556718 GSTM4Q03013 218 aa7.92□□□□□ -1.14
PRPF39-210ENST00000556718 FZD5Q13467 585 aa7.92□□□□□ -1.14
PRPF39-210ENST00000556718 PAOXQ6QHF9 649 aa7.92□□□□□ -1.14
PRPF39-210ENST00000556718 BHLHE41Q9C0J9 482 aaPredicted RBP7.92□□□□□ -1.14
PRPF39-210ENST00000556718 SOX17Q9H6I2 414 aaPredicted RBP7.92□□□□□ -1.14
PRPF39-210ENST00000556718 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
PRPF39-210ENST00000556718 EDN3P14138 238 aa7.91□□□□□ -1.14
PRPF39-210ENST00000556718 CBLL1Q75N03 491 aa7.91□□□□□ -1.14
PRPF39-210ENST00000556718 GATA6Q92908 595 aa7.91□□□□□ -1.14
PRPF39-210ENST00000556718 TBC1D32Q96NH3 1257 aa7.91□□□□□ -1.14
PRPF39-210ENST00000556718 NRSN2Q9GZP1 204 aa7.91□□□□□ -1.14
PRPF39-210ENST00000556718 PRKAG2Q9UGJ0 569 aa7.91□□□□□ -1.14
PRPF39-210ENST00000556718 CTSBP07858 339 aa7.9□□□□□ -1.14
PRPF39-210ENST00000556718 SOX4Q06945 474 aaPredicted RBP7.9□□□□□ -1.14
PRPF39-210ENST00000556718 ZAR1Q86SH2 424 aa7.9□□□□□ -1.14
PRPF39-210ENST00000556718 SNX29Q8TEQ0 813 aa7.9□□□□□ -1.14
PRPF39-210ENST00000556718 EZH1Q92800 747 aaPredicted RBP7.9□□□□□ -1.14
PRPF39-210ENST00000556718 CYP26A1O43174 497 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms