RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 KIAA0825Q8IV33 1275 aa13.33□□□□□ -0.28
GABRB3-211ENST00000556636 ZBED3Q96IU2 234 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-211ENST00000556636 GLIS2Q9BZE0 524 aaPredicted RBP13.33□□□□□ -0.28
GABRB3-211ENST00000556636 ZBTB40Q9NUA8 1239 aa13.33□□□□□ -0.28
GABRB3-211ENST00000556636 COG6Q9Y2V7 657 aa13.33□□□□□ -0.28
GABRB3-211ENST00000556636 MMP14P50281 582 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 TIMM10P62072 90 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 TFCP2Q12800 502 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 PDE3AQ14432 1141 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 NBPF9Q3BBW0 867 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 CAVIN4Q5BKX8 364 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 CEP85Q6P2H3 762 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 USP48Q86UV5 1035 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
GABRB3-211ENST00000556636 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-211ENST00000556636 TMEM88BA6NKF7 163 aa13.31□□□□□ -0.28
GABRB3-211ENST00000556636 WNT10BO00744 389 aa13.31□□□□□ -0.28
GABRB3-211ENST00000556636 SLC5A1P13866 664 aa13.31□□□□□ -0.28
GABRB3-211ENST00000556636 GRIK5Q16478 980 aa13.31□□□□□ -0.28
GABRB3-211ENST00000556636 ATP2B3Q16720 1220 aa13.31□□□□□ -0.28
GABRB3-211ENST00000556636 OGFOD1Q8N543 542 aa13.31□□□□□ -0.28
GABRB3-211ENST00000556636 NOP58Q9Y2X3 529 aaKnown RBP13.31□□□□□ -0.28
GABRB3-211ENST00000556636 ZNF646O15015 1829 aaPredicted RBP13.31□□□□□ -0.28
GABRB3-211ENST00000556636 PSME4Q14997 1843 aa13.31□□□□□ -0.28
GABRB3-211ENST00000556636 ZBTB22O15209 634 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 ADORA1P30542 326 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 VPS37DQ86XT2 251 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 MTMR14Q8NCE2 650 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 DDX19BQ9UMR2 479 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 PCDHAC2Q9Y5I4 1007 aa13.3□□□□□ -0.28
GABRB3-211ENST00000556636 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
GABRB3-211ENST00000556636 PHKA1P46020 1223 aa13.29□□□□□ -0.28
GABRB3-211ENST00000556636 G3BP1Q13283 466 aaKnown RBP eCLIP13.29□□□□□ -0.28
GABRB3-211ENST00000556636 MFSD14BQ5SR56 506 aa13.29□□□□□ -0.28
GABRB3-211ENST00000556636 ANGEL2Q5VTE6 544 aaKnown RBP13.29□□□□□ -0.28
GABRB3-211ENST00000556636 KRT26Q7Z3Y9 468 aa13.29□□□□□ -0.28
GABRB3-211ENST00000556636 DCPSQ96C86 337 aaKnown RBP13.29□□□□□ -0.28
GABRB3-211ENST00000556636 GGA3Q9NZ52 723 aa13.29□□□□□ -0.28
GABRB3-211ENST00000556636 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
GABRB3-211ENST00000556636 ADM5C9JUS6 153 aa13.28□□□□□ -0.28
GABRB3-211ENST00000556636 F8W031 263 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-211ENST00000556636 SURF6O75683 361 aaKnown RBP13.28□□□□□ -0.28
GABRB3-211ENST00000556636 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-211ENST00000556636 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-211ENST00000556636 XAGE2Q96GT9 111 aa13.28□□□□□ -0.28
GABRB3-211ENST00000556636 PRMT6Q96LA8 375 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-211ENST00000556636 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
GABRB3-211ENST00000556636 AOX1Q06278 1338 aa13.28□□□□□ -0.28
GABRB3-211ENST00000556636 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
GABRB3-211ENST00000556636 CCDC102BQ68D86 513 aa13.27□□□□□ -0.29
GABRB3-211ENST00000556636 JMYQ8N9B5 988 aa13.27□□□□□ -0.29
GABRB3-211ENST00000556636 TTF2Q9UNY4 1162 aaKnown RBP13.27□□□□□ -0.29
GABRB3-211ENST00000556636 AKAP2Q9Y2D5 859 aa13.27□□□□□ -0.29
GABRB3-211ENST00000556636 PITPNM2Q9BZ72 1349 aa13.27□□□□□ -0.29
GABRB3-211ENST00000556636 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 RASSF10A6NK89 507 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 FRAT2O75474 233 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-211ENST00000556636 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 DLGAP5Q15398 846 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 SULF1Q8IWU6 871 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-211ENST00000556636 TBC1D22AQ8WUA7 517 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 MRIQ9BWK5 157 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 GPR108Q9NPR9 543 aa13.26□□□□□ -0.29
GABRB3-211ENST00000556636 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
GABRB3-211ENST00000556636 PCNTO95613 3336 aa13.25□□□□□ -0.29
GABRB3-211ENST00000556636 COL1A1P02452 1464 aaPredicted RBP13.25□□□□□ -0.29
GABRB3-211ENST00000556636 HDLBPQ00341 1268 aaKnown RBP13.25□□□□□ -0.29
GABRB3-211ENST00000556636 WDR66Q8TBY9 1149 aa13.25□□□□□ -0.29
GABRB3-211ENST00000556636 NEUROD6Q96NK8 337 aa13.25□□□□□ -0.29
GABRB3-211ENST00000556636 SERPINA10Q9UK55 444 aa13.25□□□□□ -0.29
GABRB3-211ENST00000556636 SUGT1Q9Y2Z0 365 aa13.25□□□□□ -0.29
GABRB3-211ENST00000556636 TLL2Q9Y6L7 1015 aa13.25□□□□□ -0.29
GABRB3-211ENST00000556636 POLR2AP24928 1970 aaKnown RBP13.25□□□□□ -0.29
GABRB3-211ENST00000556636 CNTNAP1P78357 1384 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 SEMA3EO15041 775 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 CRKP46108 304 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
GABRB3-211ENST00000556636 RASGRF1Q13972 1273 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 DEFB115Q30KQ5 88 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 TNNI3KQ59H18 835 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 SAPCD2Q86UD0 394 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
GABRB3-211ENST00000556636 GNL3LQ9NVN8 582 aaKnown RBP13.24□□□□□ -0.29
GABRB3-211ENST00000556636 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 FPGT-TNNI3KV9GXZ4 949 aa13.24□□□□□ -0.29
GABRB3-211ENST00000556636 SALL1Q9NSC2 1324 aa13.23□□□□□ -0.29
GABRB3-211ENST00000556636 VEGFBP49765 207 aa13.23□□□□□ -0.29
GABRB3-211ENST00000556636 EAF2Q96CJ1 260 aaPredicted RBP13.23□□□□□ -0.29
GABRB3-211ENST00000556636 ZNF408Q9H9D4 720 aa13.23□□□□□ -0.29
GABRB3-211ENST00000556636 EXOC6BQ9Y2D4 811 aa13.23□□□□□ -0.29
GABRB3-211ENST00000556636 CLRN2A0PK11 232 aa13.22□□□□□ -0.29
GABRB3-211ENST00000556636 PRDX5P30044 214 aa13.22□□□□□ -0.29
GABRB3-211ENST00000556636 RBM5P52756 815 aaKnown RBP eCLIP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms