RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 ATP2B4P23634 1241 aa9.78□□□□□ -0.84
HNRNPC-226ENST00000556628 RPS12P25398 132 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-226ENST00000556628 IGHMBP2P38935 993 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-226ENST00000556628 DIEXFQ68CQ4 756 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-226ENST00000556628 TTLL11Q8NHH1 800 aa9.78□□□□□ -0.84
HNRNPC-226ENST00000556628 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-226ENST00000556628 DPF2Q92785 391 aa9.78□□□□□ -0.84
HNRNPC-226ENST00000556628 COL4A1P02462 1669 aa9.77□□□□□ -0.84
HNRNPC-226ENST00000556628 H7C1W4 665 aa9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 GCKRQ14397 625 aa9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 NBR1Q14596 966 aa9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 GPR101Q96P66 508 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 MPHOSPH8Q99549 860 aa9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 CRISPLD2Q9H0B8 497 aa9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 BSDC1Q9NW68 430 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 VPS9D1Q9Y2B5 631 aa9.77□□□□□ -0.85
HNRNPC-226ENST00000556628 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 RASSF10A6NK89 507 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 CDC37L1Q7L3B6 337 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 KCNV2Q8TDN2 545 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 PLA2G12BQ9BX93 195 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 GREM2Q9H772 168 aa9.76□□□□□ -0.85
HNRNPC-226ENST00000556628 ANKRD18BA2A2Z9 1011 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 TRAF5O00463 557 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 ITGA6P23229 1130 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 PDE4AP27815 886 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 ECE1P42892 770 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 VEGFBP49765 207 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 CCT4P50991 539 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 TBC1D10BQ4KMP7 808 aaPredicted RBP9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 PPP1R15BQ5SWA1 713 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 TRPM4Q8TD43 1214 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 ANKRD2Q9GZV1 360 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 ZNF408Q9H9D4 720 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 PGAP2Q9UHJ9 254 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 MINPP1Q9UNW1 487 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 LEMD3Q9Y2U8 911 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 PSME4Q14997 1843 aa9.75□□□□□ -0.85
HNRNPC-226ENST00000556628 F6X3S4 739 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 CELF2O95319 508 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 VIL1P09327 827 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 KCNJ4P48050 445 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 HIRAP54198 1017 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 MAP2K1Q02750 393 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 FMR1Q06787 632 aaKnown RBP eCLIP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 GRM1Q13255 1194 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 BEND3Q5T5X7 828 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 RSBN1LQ6PCB5 846 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 SLC4A10Q6U841 1118 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 SAMD7Q7Z3H4 446 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 PODNQ7Z5L7 613 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 AGBL3Q8NEM8 1001 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 DCPSQ96C86 337 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 SLC4A5Q9BY07 1137 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 GLIS2Q9BZE0 524 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 KCNQ5Q9NR82 932 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 C9orf78Q9NZ63 289 aaPredicted RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 MED23Q9ULK4 1368 aa9.74□□□□□ -0.85
HNRNPC-226ENST00000556628 SHTN1A0MZ66 631 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 USP17L3A6NCW0 530 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 USP17L4A6NCW7 530 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 E9PSI1 815 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 GRM8O00222 908 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 CSF1RP07333 972 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 IFIT5Q13325 482 aaKnown RBP9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 FAM161AQ3B820 660 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 TAF7LQ5H9L4 462 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 COL13A1Q5TAT6 717 aaPredicted RBP9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 USP17L1Q7RTZ2 530 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 TNS4Q8IZW8 715 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 BEGAINQ9BUH8 593 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 SRCIN1Q9C0H9 1055 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 TLL2Q9Y6L7 1015 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 SCN9AQ15858 1988 aa9.73□□□□□ -0.85
HNRNPC-226ENST00000556628 ALDH1L1O75891 902 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 CASP7P55210 303 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 MFSD10Q14728 455 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 CCDC57Q2TAC2 916 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 CST9Q5W186 159 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 KRT26Q7Z3Y9 468 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 SULF1Q8IWU6 871 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 CAPNS2Q96L46 248 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 COA1Q9GZY4 146 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 ZNF804BA4D1E1 1349 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 ZNF521Q96K83 1311 aa9.72□□□□□ -0.85
HNRNPC-226ENST00000556628 FOXN1O15353 648 aa9.71□□□□□ -0.86
HNRNPC-226ENST00000556628 USP17L8P0C7I0 530 aa9.71□□□□□ -0.86
HNRNPC-226ENST00000556628 PTPREP23469 700 aa9.71□□□□□ -0.86
HNRNPC-226ENST00000556628 CTCFP49711 727 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-226ENST00000556628 FOSBP53539 338 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms