RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 USP17L12C9JPN9 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L11C9JVI0 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L21D6R901 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L18D6R9N7 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L22D6RA61 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L17D6RBQ6 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L19D6RCP7 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L20D6RJB6 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 CSB-PGBD3P0DP91 1061 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 SEC13P55735 322 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L24Q0WX57 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 ANKMY2Q8IV38 441 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 PGBD3Q8N328 593 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 STAG2Q8N3U4 1231 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 PLVAPQ9BX97 442 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 C1orf115Q9H7X2 142 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 KNSTRNQ9Y448 316 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP3Q9Y6I4 520 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 NWD1Q149M9 1564 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 NRXN3Q9Y4C0 1643 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 PARD3Q8TEW0 1356 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 ROBO2Q9HCK4 1378 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 TRPM1Q7Z4N2 1603 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 SAFB2Q14151 953 aaKnown RBP eCLIP7.94□□□□□ -1.14
CPSF2-205ENST00000556622 TNS4Q8IZW8 715 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 GAS2L2Q8NHY3 880 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 C7orf43Q8WVR3 580 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 CRISPLD1Q9H336 500 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 TRAK1Q9UPV9 953 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 ABCC11Q96J66 1382 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 DISP3Q9P2K9 1392 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 NPC1L1Q9UHC9 1359 aa7.94□□□□□ -1.14
CPSF2-205ENST00000556622 SFI1A8K8P3 1242 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 HIRAP54198 1017 aaPredicted RBP7.93□□□□□ -1.14
CPSF2-205ENST00000556622 AAMPQ13685 434 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 WDR43Q15061 677 aaKnown RBP eCLIP7.93□□□□□ -1.14
CPSF2-205ENST00000556622 EFHC2Q5JST6 749 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 NBPF11Q86T75 865 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 FCHSD1Q86WN1 690 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 ZNF594Q96JF6 807 aaPredicted RBP7.93□□□□□ -1.14
CPSF2-205ENST00000556622 PRAM1Q96QH2 718 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 ZDHHC3Q9NYG2 299 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 RCAN3Q9UKA8 241 aa7.93□□□□□ -1.14
CPSF2-205ENST00000556622 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.92□□□□□ -1.14
CPSF2-205ENST00000556622 ATG7O95352 703 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 SPATA31C1P0DKV0 1188 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 NOS2P35228 1153 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 DPYDQ12882 1025 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 PRSS36Q5K4E3 855 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 BRINP3Q76B58 766 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 ZDHHC1Q8WTX9 485 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 ORAI2Q96SN7 254 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 PIK3C2GO75747 1445 aa7.92□□□□□ -1.14
CPSF2-205ENST00000556622 YTHDC2Q9H6S0 1430 aaKnown RBP7.92□□□□□ -1.14
CPSF2-205ENST00000556622 C21orf2O43822 256 aa7.91□□□□□ -1.14
CPSF2-205ENST00000556622 ATP4AP20648 1035 aa7.91□□□□□ -1.14
CPSF2-205ENST00000556622 CCDC184Q52MB2 194 aa7.91□□□□□ -1.14
CPSF2-205ENST00000556622 SLC9A9Q8IVB4 645 aa7.91□□□□□ -1.14
CPSF2-205ENST00000556622 TSEN2Q8NCE0 465 aaKnown RBP7.91□□□□□ -1.14
CPSF2-205ENST00000556622 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
CPSF2-205ENST00000556622 XRN1Q8IZH2 1706 aaKnown RBP7.9□□□□□ -1.14
CPSF2-205ENST00000556622 IFT172Q9UG01 1749 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 MYOM2P54296 1465 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 ADGRL3Q9HAR2 1447 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 RRP1P56182 461 aaKnown RBP7.9□□□□□ -1.14
CPSF2-205ENST00000556622 NBPF1Q3BBV0 1214 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 DDX17Q92841 729 aaKnown RBP7.9□□□□□ -1.14
CPSF2-205ENST00000556622 LRRC59Q96AG4 307 aaKnown RBP7.9□□□□□ -1.14
CPSF2-205ENST00000556622 PBXIP1Q96AQ6 731 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 GOLGA2P5Q9HBQ8 144 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 USP35Q9P2H5 1018 aa7.9□□□□□ -1.14
CPSF2-205ENST00000556622 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
CPSF2-205ENST00000556622 KIAA1210Q9ULL0 1709 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 ROBO1Q9Y6N7 1651 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 NRXN1Q9ULB1 1477 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 DCCP43146 1447 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 PTCH1Q13635 1447 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 ATAD2Q6PL18 1390 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 PLEKHH1Q9ULM0 1364 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 EML1O00423 815 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 FOXO3O43524 673 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 RFX1P22670 979 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 PLA2G4AP47712 749 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 PSMA6P60900 246 aaKnown RBP7.89□□□□□ -1.15
CPSF2-205ENST00000556622 C1orf53Q5VUE5 145 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 NLRP8Q86W28 1048 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 IPO9Q96P70 1041 aaKnown RBP7.89□□□□□ -1.15
CPSF2-205ENST00000556622 PUS7Q96PZ0 661 aaKnown RBP7.89□□□□□ -1.15
CPSF2-205ENST00000556622 ZCCHC2Q9C0B9 1178 aaKnown RBP7.89□□□□□ -1.15
CPSF2-205ENST00000556622 TSPAN10Q9H1Z9 355 aaPredicted RBP7.89□□□□□ -1.15
CPSF2-205ENST00000556622 CABP1Q9NZU7 370 aa7.89□□□□□ -1.15
CPSF2-205ENST00000556622 NOP58Q9Y2X3 529 aaKnown RBP7.89□□□□□ -1.15
CPSF2-205ENST00000556622 NINLQ9Y2I6 1382 aa7.88□□□□□ -1.15
CPSF2-205ENST00000556622 CD33P20138 364 aa7.88□□□□□ -1.15
CPSF2-205ENST00000556622 ADH6P28332 368 aa7.88□□□□□ -1.15
CPSF2-205ENST00000556622 WEE1P30291 646 aa7.88□□□□□ -1.15
CPSF2-205ENST00000556622 IRX6P78412 446 aaPredicted RBP7.88□□□□□ -1.15
CPSF2-205ENST00000556622 MEX3CQ5U5Q3 659 aaKnown RBP7.88□□□□□ -1.15
CPSF2-205ENST00000556622 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms