RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
CRX-203ENST00000556527 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
CRX-203ENST00000556527 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
CRX-203ENST00000556527 PLIN1O60240 522 aa12.43□□□□□ -0.42
CRX-203ENST00000556527 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
CRX-203ENST00000556527 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
CRX-203ENST00000556527 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
CRX-203ENST00000556527 FANCIQ9NVI1 1328 aa12.42□□□□□ -0.42
CRX-203ENST00000556527 ZBTB48P10074 688 aaPredicted RBP12.42□□□□□ -0.42
CRX-203ENST00000556527 CFAP100Q494V2 611 aa12.42□□□□□ -0.42
CRX-203ENST00000556527 LDLRAD1Q5T700 205 aa12.42□□□□□ -0.42
CRX-203ENST00000556527 LDHAL6AQ6ZMR3 332 aa12.42□□□□□ -0.42
CRX-203ENST00000556527 MRS2Q9HD23 443 aa12.42□□□□□ -0.42
CRX-203ENST00000556527 C9orf78Q9NZ63 289 aaPredicted RBP12.42□□□□□ -0.42
CRX-203ENST00000556527 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 SNAP23O00161 211 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 CASP7P55210 303 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 TNFAIP1Q13829 316 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 C15orf52Q6ZUT6 534 aaKnown RBP12.41□□□□□ -0.42
CRX-203ENST00000556527 IFNL1Q8IU54 200 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 ZBED3Q96IU2 234 aaPredicted RBP12.41□□□□□ -0.42
CRX-203ENST00000556527 CFHR5Q9BXR6 569 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 FZD1Q9UP38 647 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 JAG2Q9Y219 1238 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 TRIM17Q9Y577 477 aa12.41□□□□□ -0.42
CRX-203ENST00000556527 UNCXA6NJT0 531 aa12.4□□□□□ -0.42
CRX-203ENST00000556527 IL1R1P14778 569 aa12.4□□□□□ -0.42
CRX-203ENST00000556527 FKBP1AP62942 108 aaKnown RBP12.4□□□□□ -0.42
CRX-203ENST00000556527 VPS37DQ86XT2 251 aa12.4□□□□□ -0.42
CRX-203ENST00000556527 WDR63Q8IWG1 891 aa12.4□□□□□ -0.42
CRX-203ENST00000556527 CERS5Q8N5B7 392 aa12.4□□□□□ -0.42
CRX-203ENST00000556527 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
CRX-203ENST00000556527 WNK4Q96J92 1243 aa12.4□□□□□ -0.42
CRX-203ENST00000556527 F6X3S4 739 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 GRM8O00222 908 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 FRAT2O75474 233 aaPredicted RBP12.39□□□□□ -0.43
CRX-203ENST00000556527 FOXO4P98177 505 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
CRX-203ENST00000556527 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
CRX-203ENST00000556527 MFSD14BQ5SR56 506 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 SLC4A10Q6U841 1118 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 ANKRD13AQ8IZ07 590 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 CLMNQ96JQ2 1002 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 PDE4DIPQ5VU43 2346 aa12.39□□□□□ -0.43
CRX-203ENST00000556527 VAMP4O75379 141 aa12.38□□□□□ -0.43
CRX-203ENST00000556527 WDHD1O75717 1129 aaPredicted RBP12.38□□□□□ -0.43
CRX-203ENST00000556527 TNNI2P48788 182 aa12.38□□□□□ -0.43
CRX-203ENST00000556527 RASA3Q14644 834 aa12.38□□□□□ -0.43
CRX-203ENST00000556527 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
CRX-203ENST00000556527 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
CRX-203ENST00000556527 BEND3Q5T5X7 828 aa12.38□□□□□ -0.43
CRX-203ENST00000556527 NBPF12Q5TAG4 269 aaPredicted RBP12.38□□□□□ -0.43
CRX-203ENST00000556527 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
CRX-203ENST00000556527 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
CRX-203ENST00000556527 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
CRX-203ENST00000556527 R3HDMLQ9H3Y0 253 aa12.38□□□□□ -0.43
CRX-203ENST00000556527 TTF2Q9UNY4 1162 aaKnown RBP12.38□□□□□ -0.43
CRX-203ENST00000556527 ANP32CO43423 234 aa12.37□□□□□ -0.43
CRX-203ENST00000556527 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
CRX-203ENST00000556527 GCC1Q96CN9 775 aa12.37□□□□□ -0.43
CRX-203ENST00000556527 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
CRX-203ENST00000556527 PCDHAC2Q9Y5I4 1007 aa12.37□□□□□ -0.43
CRX-203ENST00000556527 IGF2BP3O00425 579 aaKnown RBP eCLIP12.36□□□□□ -0.43
CRX-203ENST00000556527 UBE4AQ14139 1066 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 OTOP1Q7RTM1 612 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 OPTNQ96CV9 577 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 ELP3Q9H9T3 547 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 CSADQ9Y600 493 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 ZNF646O15015 1829 aaPredicted RBP12.36□□□□□ -0.43
CRX-203ENST00000556527 IRS2Q9Y4H2 1338 aa12.36□□□□□ -0.43
CRX-203ENST00000556527 TCP10L2B9ZVM9 353 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 USP2O75604 605 aaPredicted RBP12.35□□□□□ -0.43
CRX-203ENST00000556527 ALDH1L1O75891 902 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 GYG1P46976 350 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 SP3Q02447 781 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 CRHR2Q13324 411 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 CAVIN4Q5BKX8 364 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
CRX-203ENST00000556527 TMOD2Q9NZR1 351 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 ZNF70Q9UC06 446 aaPredicted RBP12.35□□□□□ -0.43
CRX-203ENST00000556527 FAM205AQ6ZU69 1335 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 MROH5Q6ZUA9 1318 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 SSC5DA1L4H1 1573 aa12.35□□□□□ -0.43
CRX-203ENST00000556527 CHAF1AQ13111 956 aaPredicted RBP12.34□□□□□ -0.43
CRX-203ENST00000556527 EPHA10Q5JZY3 1008 aa12.34□□□□□ -0.43
CRX-203ENST00000556527 DZIP1LQ8IYY4 767 aaKnown RBP12.34□□□□□ -0.43
CRX-203ENST00000556527 TDRD7Q8NHU6 1098 aaKnown RBP12.34□□□□□ -0.43
CRX-203ENST00000556527 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
CRX-203ENST00000556527 PTPN22Q9Y2R2 807 aa12.34□□□□□ -0.43
CRX-203ENST00000556527 CRKP46108 304 aa12.33□□□□□ -0.44
CRX-203ENST00000556527 GTF2A2P52657 109 aa12.33□□□□□ -0.44
CRX-203ENST00000556527 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms