RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 ATICP31939 592 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 PHKA2P46019 1235 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 RWDD2BP57060 319 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 SESN3P58005 492 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 ADCY2Q08462 1091 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 COX20Q5RI15 118 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 AP1ARQ63HQ0 302 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 C16orf46Q6P387 395 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 CCAR1Q8IX12 1150 aaKnown RBP7.32□□□□□ -1.24
TDP1-215ENST00000556498 ALDH16A1Q8IZ83 802 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 VPS37AQ8NEZ2 397 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 CCDC47Q96A33 483 aaKnown RBP7.32□□□□□ -1.24
TDP1-215ENST00000556498 SAP130Q9H0E3 1048 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 QTRT2Q9H974 415 aaKnown RBP7.32□□□□□ -1.24
TDP1-215ENST00000556498 RMI1Q9H9A7 625 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 DACH1Q9UI36 760 aa7.32□□□□□ -1.24
TDP1-215ENST00000556498 U2SURPO15042 1029 aaKnown RBP7.31□□□□□ -1.24
TDP1-215ENST00000556498 KINO60870 393 aaKnown RBP7.31□□□□□ -1.24
TDP1-215ENST00000556498 CDKL5O76039 1030 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 CCDC159P0C7I6 412 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 SKILP12757 684 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 FOSL1P15407 271 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 FKBP4Q02790 459 aaKnown RBP eCLIP7.31□□□□□ -1.24
TDP1-215ENST00000556498 ZNF211Q13398 564 aaPredicted RBP7.31□□□□□ -1.24
TDP1-215ENST00000556498 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 PCGF5Q86SE9 256 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 LCA5Q86VQ0 697 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 HSCBQ8IWL3 235 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 HELQQ8TDG4 1101 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 C7orf43Q8WVR3 580 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 RSPH1Q8WYR4 309 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 PMM1Q92871 262 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 MYO19Q96H55 970 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 ANO2Q9NQ90 1003 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 AKAP2Q9Y2D5 859 aa7.31□□□□□ -1.24
TDP1-215ENST00000556498 CTDP1Q9Y5B0 961 aaPredicted RBP7.31□□□□□ -1.24
TDP1-215ENST00000556498 SHTN1A0MZ66 631 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 IMPDH2P12268 514 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 VCAM1P19320 739 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
TDP1-215ENST00000556498 TXLNAP40222 546 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 CBX1P83916 185 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 CCDC173Q0VFZ6 552 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 MTMR3Q13615 1198 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 RABEP1Q15276 862 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 TAF7Q15545 349 aaPredicted RBP7.3□□□□□ -1.24
TDP1-215ENST00000556498 RTN1Q16799 776 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 MFSD4BQ5TF39 518 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 TTLL5Q6EMB2 1281 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 EFCAB13Q8IY85 973 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 MIGA1Q8NAN2 632 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 UBXN4Q92575 508 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 AIDAQ96BJ3 306 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 NGLY1Q96IV0 654 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 GBP4Q96PP9 640 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 SH3GL3Q99963 347 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 PHACTR1Q9C0D0 580 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 IFT122Q9HBG6 1241 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 ZDHHC3Q9NYG2 299 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 USP25Q9UHP3 1055 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 DNMT3LQ9UJW3 386 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 LRFN2Q9ULH4 789 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 JRKLQ9Y4A0 524 aa7.3□□□□□ -1.24
TDP1-215ENST00000556498 RHOQP17081 205 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 NPR3P17342 541 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 ATP2B1P20020 1258 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 COL19A1Q14993 1142 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 ECM1Q16610 540 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 MAP9Q49MG5 647 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 CCDC30Q5VVM6 783 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 UBE2Q1Q7Z7E8 422 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 TRIM74Q86UV6 250 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 TRIM73Q86UV7 250 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 SUGP1Q8IWZ8 645 aaKnown RBP7.29□□□□□ -1.24
TDP1-215ENST00000556498 RBM12BQ8IXT5 1001 aaKnown RBP7.29□□□□□ -1.24
TDP1-215ENST00000556498 RPUSD2Q8IZ73 545 aaKnown RBP7.29□□□□□ -1.24
TDP1-215ENST00000556498 MYOCDQ8IZQ8 938 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 CCDC191Q8NCU4 936 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 C1orf131Q8NDD1 294 aaKnown RBP7.29□□□□□ -1.24
TDP1-215ENST00000556498 PMFBP1Q8TBY8 1022 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 TNPO1Q92973 898 aaKnown RBP7.29□□□□□ -1.24
TDP1-215ENST00000556498 C8orf37Q96NL8 207 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 FMNL2Q96PY5 1086 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 RWDD1Q9H446 243 aaPredicted RBP7.29□□□□□ -1.24
TDP1-215ENST00000556498 TIMMDC1Q9NPL8 285 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 TRPV5Q9NQA5 729 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 IRAK4Q9NWZ3 460 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 CPSF2Q9P2I0 782 aaKnown RBP7.29□□□□□ -1.24
TDP1-215ENST00000556498 NRBP1Q9UHY1 535 aa7.29□□□□□ -1.24
TDP1-215ENST00000556498 A0A1B0GUL7 405 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 RBM47A0AV96 593 aaKnown RBP7.28□□□□□ -1.24
TDP1-215ENST00000556498 H3BRB1 525 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 TNFRSF10BO14763 440 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 MAP2K2P36507 400 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 PPP2R5AQ15172 486 aa7.28□□□□□ -1.24
TDP1-215ENST00000556498 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.28□□□□□ -1.24
TDP1-215ENST00000556498 CCDC92Q53HC0 331 aaPredicted RBP7.28□□□□□ -1.24
TDP1-215ENST00000556498 C11orf96Q7Z7L8 435 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms