RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SAMD7Q7Z3H4 446 aa14.39□□□□□ -0.11
SLIRP-205ENST00000556310 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
SLIRP-205ENST00000556310 FBXW7Q969H0 707 aa14.39□□□□□ -0.11
SLIRP-205ENST00000556310 CIAO1O76071 339 aa14.38□□□□□ -0.11
SLIRP-205ENST00000556310 PDE8BO95263 885 aa14.38□□□□□ -0.11
SLIRP-205ENST00000556310 EGFRP00533 1210 aa14.38□□□□□ -0.11
SLIRP-205ENST00000556310 GNAI2P04899 355 aa14.38□□□□□ -0.11
SLIRP-205ENST00000556310 USP17L8P0C7I0 530 aa14.38□□□□□ -0.11
SLIRP-205ENST00000556310 TTLL5Q6EMB2 1281 aa14.38□□□□□ -0.11
SLIRP-205ENST00000556310 POLR2AP24928 1970 aaKnown RBP14.38□□□□□ -0.11
SLIRP-205ENST00000556310 ECM29Q5VYK3 1845 aa14.37□□□□□ -0.11
SLIRP-205ENST00000556310 RLBP1P12271 317 aa14.37□□□□□ -0.11
SLIRP-205ENST00000556310 GTF2IP78347 998 aa14.37□□□□□ -0.11
SLIRP-205ENST00000556310 PUM3Q15397 648 aaKnown RBP14.37□□□□□ -0.11
SLIRP-205ENST00000556310 ATG9AQ7Z3C6 839 aa14.37□□□□□ -0.11
SLIRP-205ENST00000556310 DNAJC5GQ8N7S2 189 aa14.37□□□□□ -0.11
SLIRP-205ENST00000556310 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
SLIRP-205ENST00000556310 TMEM88BA6NKF7 163 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 SRGAP3O43295 1099 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 GYG1P46976 350 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 MMP14P50281 582 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 KLRG1Q96E93 195 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 MXD3Q9BW11 206 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 SIL1Q9H173 461 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
SLIRP-205ENST00000556310 FGFR2P21802 821 aa14.35□□□□□ -0.11
SLIRP-205ENST00000556310 HIBADHP31937 336 aaKnown RBP14.35□□□□□ -0.11
SLIRP-205ENST00000556310 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-205ENST00000556310 FKBP1AP62942 108 aaKnown RBP14.35□□□□□ -0.11
SLIRP-205ENST00000556310 RBM26Q5T8P6 1007 aaKnown RBP14.35□□□□□ -0.11
SLIRP-205ENST00000556310 OGFOD1Q8N543 542 aa14.35□□□□□ -0.11
SLIRP-205ENST00000556310 TDRD7Q8NHU6 1098 aaKnown RBP14.35□□□□□ -0.11
SLIRP-205ENST00000556310 FAM84BQ96KN1 310 aaPredicted RBP14.35□□□□□ -0.11
SLIRP-205ENST00000556310 MYOZ2Q9NPC6 264 aa14.35□□□□□ -0.11
SLIRP-205ENST00000556310 PA2G4Q9UQ80 394 aaKnown RBP14.35□□□□□ -0.11
SLIRP-205ENST00000556310 FAM205AQ6ZU69 1335 aa14.35□□□□□ -0.11
SLIRP-205ENST00000556310 TRAF5O00463 557 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 IFIT1P09914 478 aaKnown RBP14.34□□□□□ -0.11
SLIRP-205ENST00000556310 MS4A1P11836 297 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 SLC5A1P13866 664 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 CAVIN4Q5BKX8 364 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 CDC37L1Q7L3B6 337 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 FBXO33Q7Z6M2 555 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 VPS37DQ86XT2 251 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 KIAA0825Q8IV33 1275 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 CERS5Q8N5B7 392 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 LPIN2Q92539 896 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 GLIS2Q9BZE0 524 aaPredicted RBP14.34□□□□□ -0.11
SLIRP-205ENST00000556310 GGA3Q9NZ52 723 aa14.34□□□□□ -0.11
SLIRP-205ENST00000556310 SASH1O94885 1247 aa14.33□□□□□ -0.12
SLIRP-205ENST00000556310 FMR1Q06787 632 aaKnown RBP eCLIP14.33□□□□□ -0.12
SLIRP-205ENST00000556310 KRT26Q7Z3Y9 468 aa14.33□□□□□ -0.12
SLIRP-205ENST00000556310 PANK1Q8TE04 598 aa14.33□□□□□ -0.12
SLIRP-205ENST00000556310 DCPSQ96C86 337 aaKnown RBP14.33□□□□□ -0.12
SLIRP-205ENST00000556310 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
SLIRP-205ENST00000556310 HDAC9Q9UKV0 1011 aa14.33□□□□□ -0.12
SLIRP-205ENST00000556310 PITPNM2Q9BZ72 1349 aa14.33□□□□□ -0.12
SLIRP-205ENST00000556310 CNTNAP1P78357 1384 aa14.33□□□□□ -0.12
SLIRP-205ENST00000556310 PNMA6EA0A0J9YXQ4 647 aa14.32□□□□□ -0.12
SLIRP-205ENST00000556310 ZBTB7BO15156 539 aaPredicted RBP14.32□□□□□ -0.12
SLIRP-205ENST00000556310 SCARF1Q14162 830 aa14.32□□□□□ -0.12
SLIRP-205ENST00000556310 ATP2B3Q16720 1220 aa14.32□□□□□ -0.12
SLIRP-205ENST00000556310 JAG2Q9Y219 1238 aa14.32□□□□□ -0.12
SLIRP-205ENST00000556310 ASTN2O75129 1339 aaPredicted RBP14.32□□□□□ -0.12
SLIRP-205ENST00000556310 THSD7BQ9C0I4 1608 aa14.31□□□□□ -0.12
SLIRP-205ENST00000556310 PYGBP11216 843 aa14.31□□□□□ -0.12
SLIRP-205ENST00000556310 MFSD14BQ5SR56 506 aa14.31□□□□□ -0.12
SLIRP-205ENST00000556310 ANGEL2Q5VTE6 544 aaKnown RBP14.31□□□□□ -0.12
SLIRP-205ENST00000556310 USP48Q86UV5 1035 aa14.31□□□□□ -0.12
SLIRP-205ENST00000556310 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
SLIRP-205ENST00000556310 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
SLIRP-205ENST00000556310 PCNTO95613 3336 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 RASSF10A6NK89 507 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 ADM5C9JUS6 153 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 WNT10BO00744 389 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 CELF2O95319 508 aaKnown RBP14.3□□□□□ -0.12
SLIRP-205ENST00000556310 BCAMP50895 628 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 CST9Q5W186 159 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 ZBED3Q96IU2 234 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-205ENST00000556310 C1orf115Q9H7X2 142 aa14.3□□□□□ -0.12
SLIRP-205ENST00000556310 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
SLIRP-205ENST00000556310 ABT1Q9ULW3 272 aaKnown RBP14.3□□□□□ -0.12
SLIRP-205ENST00000556310 IQSEC3Q9UPP2 1182 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-205ENST00000556310 COL1A1P02452 1464 aaPredicted RBP14.3□□□□□ -0.12
SLIRP-205ENST00000556310 FRAT2O75474 233 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-205ENST00000556310 CHAF1AQ13111 956 aaPredicted RBP14.29□□□□□ -0.12
SLIRP-205ENST00000556310 MVPQ14764 893 aaKnown RBP14.29□□□□□ -0.12
SLIRP-205ENST00000556310 MTMR14Q8NCE2 650 aa14.29□□□□□ -0.12
SLIRP-205ENST00000556310 SSH3Q8TE77 659 aa14.29□□□□□ -0.12
SLIRP-205ENST00000556310 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
SLIRP-205ENST00000556310 F8W031 263 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-205ENST00000556310 ATP8B2P98198 1209 aa14.28□□□□□ -0.12
SLIRP-205ENST00000556310 DLGAP5Q15398 846 aa14.28□□□□□ -0.12
SLIRP-205ENST00000556310 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-205ENST00000556310 PAPPA2Q9BXP8 1791 aa14.28□□□□□ -0.12
SLIRP-205ENST00000556310 ZNF408Q9H9D4 720 aa14.28□□□□□ -0.12
SLIRP-205ENST00000556310 DDX19BQ9UMR2 479 aa14.28□□□□□ -0.12
SLIRP-205ENST00000556310 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms