RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 CEP135Q66GS9 1140 aa6.51□□□□□ -1.37
SUPT16H-206ENST00000556309 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
SUPT16H-206ENST00000556309 LACRTQ9GZZ8 138 aa6.51□□□□□ -1.37
SUPT16H-206ENST00000556309 DLL1O00548 723 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 CPNE3O75131 537 aaKnown RBP6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 MAPK8P45983 427 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 PLCB3Q01970 1234 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 DSC3Q14574 896 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 ZSCAN29Q8IWY8 852 aaPredicted RBP6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 PMEPA1Q969W9 287 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 ASB16Q96NS5 453 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 CSRNP1Q96S65 589 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 RAXQ9Y2V3 346 aa6.5□□□□□ -1.37
SUPT16H-206ENST00000556309 TREHO43280 583 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 CDC25BP30305 580 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 PEAR1Q5VY43 1037 aaPredicted RBP6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 Q6ZS46 218 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 ALKBH8Q96BT7 664 aaKnown RBP6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 SETDB2Q96T68 719 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 OSMRQ99650 979 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 ZKSCAN3Q9BRR0 538 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 PBX4Q9BYU1 374 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 MUC3BQ9H195 1237 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 NPHS2Q9NP85 383 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 DZANK1Q9NVP4 752 aa6.49□□□□□ -1.37
SUPT16H-206ENST00000556309 PNMA6FA0A0J9YX94 578 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 SMNDC1O75940 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 NEFLP07196 543 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 EDN3P14138 238 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 CCDC27Q2M243 656 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 UVSSAQ2YD98 709 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 PI16Q6UXB8 463 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 GALNT12Q8IXK2 581 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 IL22RA1Q8N6P7 574 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 POP1Q99575 1024 aaKnown RBP6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 SH2B1Q9NRF2 756 aaPredicted RBP6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 WWC3Q9ULE0 1092 aa6.48□□□□□ -1.37
SUPT16H-206ENST00000556309 ANKRD33BA6NCL7 494 aa6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 F8W735 103 aaPredicted RBP6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 NFKBIEO00221 500 aa6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 PDE2AO00408 941 aaPredicted RBP6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 TXNDC11Q6PKC3 985 aa6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 EPS8L3Q8TE67 593 aaKnown RBP6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 CCDC74AQ96AQ1 378 aa6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 STOML1Q9UBI4 398 aa6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 OAS3Q9Y6K5 1087 aaKnown RBP6.47□□□□□ -1.37
SUPT16H-206ENST00000556309 A0A1W2PP55 124 aa6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 METTL12A8MUP2 240 aa6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 DHX15O43143 795 aaKnown RBP6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 P4HBP07237 508 aaKnown RBP6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 DNAJC14Q6Y2X3 702 aaPredicted RBP6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 ASAP3Q8TDY4 903 aa6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 CEP41Q9BYV8 373 aa6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 DNAJC25Q9H1X3 360 aa6.46□□□□□ -1.38
SUPT16H-206ENST00000556309 LINC01387J3KSC0 135 aa6.45□□□□□ -1.38
SUPT16H-206ENST00000556309 GADD45BO75293 160 aaPredicted RBP6.45□□□□□ -1.38
SUPT16H-206ENST00000556309 FMR1Q06787 632 aaKnown RBP eCLIP6.45□□□□□ -1.383e-8■■■■■ 41
SUPT16H-206ENST00000556309 TMCO4Q5TGY1 634 aa6.45□□□□□ -1.38
SUPT16H-206ENST00000556309 NXPE3Q969Y0 559 aa6.45□□□□□ -1.38
SUPT16H-206ENST00000556309 DEAF1O75398 565 aaPredicted RBP6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 WNT11O96014 354 aa6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 CDC27P30260 824 aa6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 ENOX2Q16206 610 aaKnown RBP6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 SPRED3Q2MJR0 410 aa6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 TMEM102Q8N9M5 508 aaPredicted RBP6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 EHD4Q9H223 541 aa6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 LIN7BQ9HAP6 207 aa6.44□□□□□ -1.38
SUPT16H-206ENST00000556309 PTPRAP18433 802 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 SPINK2P20155 84 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 EPHA1P21709 976 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 GRIA4P48058 902 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 DTX1Q86Y01 620 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 NPAS4Q8IUM7 802 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 TCF12Q99081 682 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 RNF19AQ9NV58 838 aa6.43□□□□□ -1.38
SUPT16H-206ENST00000556309 HGSNATQ68CP4 663 aa6.42□□□□□ -1.38
SUPT16H-206ENST00000556309 CARD10Q9BWT7 1032 aa6.42□□□□□ -1.38
SUPT16H-206ENST00000556309 NLRP2Q9NX02 1062 aa6.42□□□□□ -1.38
SUPT16H-206ENST00000556309 PPME1Q9Y570 386 aa6.42□□□□□ -1.38
SUPT16H-206ENST00000556309 ARID1BQ8NFD5 2236 aaPredicted RBP6.42□□□□□ -1.38
SUPT16H-206ENST00000556309 LDHBP07195 334 aaKnown RBP6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 GLB1P16278 677 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 TAGLNQ01995 201 aaKnown RBP6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 NFIAQ12857 509 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 GRM2Q14416 872 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 KIAA0319Q5VV43 1072 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 CCNJLQ8IV13 435 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 DBNDD2Q9BQY9 259 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 ADAM19Q9H013 955 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 SOX13Q9UN79 622 aa6.41□□□□□ -1.38
SUPT16H-206ENST00000556309 A0A096LPE4 126 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 A0A1W2PPZ6 126 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 FAM177BA6PVY3 158 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 TGFB1P01137 390 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 MFAP1P55081 439 aaKnown RBP6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 ATP2B2Q01814 1243 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 SETDB1Q15047 1291 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms