RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 LY75O60449 1722 aa12.46□□□□□ -0.41
GTF2A1-204ENST00000556268 DEPDC4Q8N2C3 294 aa12.46□□□□□ -0.41
GTF2A1-204ENST00000556268 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
GTF2A1-204ENST00000556268 GDF10P55107 478 aa12.45□□□□□ -0.42
GTF2A1-204ENST00000556268 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
GTF2A1-204ENST00000556268 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
GTF2A1-204ENST00000556268 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
GTF2A1-204ENST00000556268 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
GTF2A1-204ENST00000556268 PIGBQ92521 554 aa12.44□□□□□ -0.42
GTF2A1-204ENST00000556268 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
GTF2A1-204ENST00000556268 ZSCAN10Q96SZ4 725 aaPredicted RBP12.44□□□□□ -0.42
GTF2A1-204ENST00000556268 NOD1Q9Y239 953 aa12.44□□□□□ -0.42
GTF2A1-204ENST00000556268 PCDH11XQ9BZA7 1347 aa12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 PCDH11YQ9BZA8 1340 aa12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 SHANK3Q9BYB0 1731 aa12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 LZTS3O60299 673 aaPredicted RBP12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 NANOS1Q8WY41 292 aaKnown RBP12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 PCDHGA11Q9Y5H2 935 aa12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 FLT4P35916 1363 aa12.43□□□□□ -0.42
GTF2A1-204ENST00000556268 CDC14CA4D256 554 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 USP17L3A6NCW0 530 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 USP17L4A6NCW7 530 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 INHAP05111 366 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 TLR1Q15399 786 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 USP17L2Q6R6M4 530 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 TAS1R3Q7RTX0 852 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 USP17L1Q7RTZ2 530 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 AMIGO3Q86WK7 504 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 GPR161Q8N6U8 529 aaKnown RBP12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 CUEDC1Q9NWM3 386 aaPredicted RBP12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 PALLDQ8WX93 1383 aa12.42□□□□□ -0.42
GTF2A1-204ENST00000556268 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
GTF2A1-204ENST00000556268 ATP9BO43861 1147 aa12.41□□□□□ -0.42
GTF2A1-204ENST00000556268 GTF2IP78347 998 aa12.41□□□□□ -0.42
GTF2A1-204ENST00000556268 MSL1Q68DK7 614 aa12.41□□□□□ -0.42
GTF2A1-204ENST00000556268 TUBGCP6Q96RT7 1819 aa12.41□□□□□ -0.42
GTF2A1-204ENST00000556268 NCAPD2Q15021 1401 aa12.4□□□□□ -0.42
GTF2A1-204ENST00000556268 SMG6Q86US8 1419 aaKnown RBP12.4□□□□□ -0.42
GTF2A1-204ENST00000556268 TMEM229AB2RXF0 380 aa12.4□□□□□ -0.42
GTF2A1-204ENST00000556268 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
GTF2A1-204ENST00000556268 VWA5B2Q8N398 1253 aa12.4□□□□□ -0.42
GTF2A1-204ENST00000556268 DYRK1BQ9Y463 629 aa12.4□□□□□ -0.42
GTF2A1-204ENST00000556268 DOT1LQ8TEK3 1739 aa12.4□□□□□ -0.43
GTF2A1-204ENST00000556268 LOC102724428A0A0B4J2F2 783 aa12.39□□□□□ -0.43
GTF2A1-204ENST00000556268 SIK1P57059 783 aa12.39□□□□□ -0.43
GTF2A1-204ENST00000556268 INSM1Q01101 510 aaPredicted RBP12.39□□□□□ -0.43
GTF2A1-204ENST00000556268 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
GTF2A1-204ENST00000556268 TMEM214Q6NUQ4 689 aaKnown RBP12.39□□□□□ -0.43
GTF2A1-204ENST00000556268 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
GTF2A1-204ENST00000556268 SSFA2P28290 1259 aa12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 GTF2E1P29083 439 aaPredicted RBP12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 PHKA2P46019 1235 aa12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 GNASQ5JWF2 1037 aa12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 SMIM5Q71RC9 77 aa12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 CALR3Q96L12 384 aaKnown RBP12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 TIMMDC1Q9NPL8 285 aa12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 POLKQ9UBT6 870 aa12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 SERTAD1Q9UHV2 236 aa12.38□□□□□ -0.43
GTF2A1-204ENST00000556268 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
GTF2A1-204ENST00000556268 C4orf17Q53FE4 359 aa12.37□□□□□ -0.43
GTF2A1-204ENST00000556268 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
GTF2A1-204ENST00000556268 LINC00116Q8NCU8 138 aa12.37□□□□□ -0.43
GTF2A1-204ENST00000556268 GAS2L1Q99501 681 aaPredicted RBP12.37□□□□□ -0.43
GTF2A1-204ENST00000556268 ASAP1Q9ULH1 1129 aa12.37□□□□□ -0.43
GTF2A1-204ENST00000556268 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
GTF2A1-204ENST00000556268 PHKG2P15735 406 aa12.36□□□□□ -0.43
GTF2A1-204ENST00000556268 KRT76Q01546 638 aa12.36□□□□□ -0.43
GTF2A1-204ENST00000556268 ITPK1Q13572 414 aa12.36□□□□□ -0.43
GTF2A1-204ENST00000556268 RIPOR1Q6ZS17 1223 aa12.36□□□□□ -0.43
GTF2A1-204ENST00000556268 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
GTF2A1-204ENST00000556268 RHBDD1Q8TEB9 315 aa12.36□□□□□ -0.43
GTF2A1-204ENST00000556268 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
GTF2A1-204ENST00000556268 ADCY9O60503 1353 aa12.35□□□□□ -0.43
GTF2A1-204ENST00000556268 SMTNP53814 917 aa12.35□□□□□ -0.43
GTF2A1-204ENST00000556268 ZNF837Q96EG3 531 aaPredicted RBP12.35□□□□□ -0.43
GTF2A1-204ENST00000556268 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
GTF2A1-204ENST00000556268 PPM1GO15355 546 aaPredicted RBP12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 TRIM50Q86XT4 487 aa12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 COL25A1Q9BXS0 654 aaPredicted RBP12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 TMOD3Q9NYL9 352 aa12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 TFIP11Q9UBB9 837 aaKnown RBP12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 KIAA1024Q9UPX6 916 aa12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 IGSF1Q8N6C5 1336 aa12.34□□□□□ -0.43
GTF2A1-204ENST00000556268 C5P01031 1676 aa12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 MAP2P11137 1827 aaKnown RBP12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 TAF1LQ8IZX4 1826 aa12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 ERVV-2B6SEH9 535 aa12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 LORP23490 312 aaPredicted RBP12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 RNFT1Q5M7Z0 435 aa12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 ZNF358Q9NW07 568 aa12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 MAFBQ9Y5Q3 323 aaPredicted RBP12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
GTF2A1-204ENST00000556268 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 C4BP0C0L5 1744 aa12.32□□□□□ -0.44
GTF2A1-204ENST00000556268 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms