RNA–Protein interactions for RNA: ENST00000556264.1

SPTLC2-204, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-204ENST00000556264 ATXN7L1Q9ULK2 861 aaPredicted RBP6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 CDK11AQ9UQ88 783 aaPredicted RBP6.04□□□□□ -1.44
SPTLC2-204ENST00000556264 K7ELQ4 463 aaPredicted RBP6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 ST8SIA5O15466 376 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 GFRA3O60609 400 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 RGS20O76081 388 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 NCLP19338 710 aaKnown RBP6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 FGFR3P22607 806 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 ATP11AP98196 1134 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 NFE2L2Q16236 605 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 RPS26P11Q5JNZ5 115 aaPredicted RBP6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 NBPF6Q5VWK0 638 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 ZNF746Q6NUN9 644 aaPredicted RBP6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 ANKS3Q6ZW76 656 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 NKD1Q969G9 470 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 MRFAP1L1Q96HT8 127 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 NBPF4Q96M43 638 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 ZNF576Q9H609 170 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 DACH1Q9UI36 760 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 PRR12Q9ULL5 1215 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 STRIP2Q9ULQ0 834 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 TBX22Q9Y458 520 aa6.03□□□□□ -1.44
SPTLC2-204ENST00000556264 GHRHP01286 108 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 LMNB1P20700 586 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 CRKP46108 304 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 RPS26P62854 115 aaKnown RBP6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 GPLD1P80108 840 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 CTBSQ01459 385 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 TBC1D8BQ0IIM8 1120 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 FAM182BQ5T319 152 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 PCNX4Q63HM2 1172 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 FAM196AQ6ZSG2 479 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 ANAPC16Q96DE5 110 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 ZNF837Q96EG3 531 aaPredicted RBP6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 GMCL1Q96IK5 515 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 POP1Q99575 1024 aaKnown RBP6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 MUC3BQ9H195 1237 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 AAASQ9NRG9 546 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 TMEM39AQ9NV64 488 aa6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 DNAJB12Q9NXW2 375 aaKnown RBP6.02□□□□□ -1.45
SPTLC2-204ENST00000556264 TLR3O15455 904 aaKnown RBP6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 F13A1P00488 732 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 ITGA6P23229 1130 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 PPP2R3AQ06190 1150 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 SERINC3Q13530 473 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 SEZ6Q53EL9 994 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 CEP135Q66GS9 1140 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 BNC2Q6ZN30 1099 aaPredicted RBP6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 SYT9Q86SS6 491 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 JAZF1Q86VZ6 243 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 SLITRK4Q8IW52 837 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 NLGN1Q8N2Q7 840 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 JARID2Q92833 1246 aaPredicted RBP6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 TRIM55Q9BYV6 548 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 UBE2OQ9C0C9 1292 aaKnown RBP6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 RBSNQ9H1K0 784 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 PHF24Q9UPV7 400 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 PCDHB5Q9Y5E4 795 aa6.01□□□□□ -1.45
SPTLC2-204ENST00000556264 NRG2O14511 850 aaPredicted RBP6□□□□□ -1.45
SPTLC2-204ENST00000556264 KLF4O43474 513 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 SMNDC1O75940 238 aaKnown RBP eCLIP6□□□□□ -1.45
SPTLC2-204ENST00000556264 EIF2AK2P19525 551 aaKnown RBP6□□□□□ -1.45
SPTLC2-204ENST00000556264 PCSK7Q16549 785 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 CCDC81Q6ZN84 652 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 TRIM42Q8IWZ5 723 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 FBXO27Q8NI29 283 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 HNRNPLLQ8WVV9 542 aaKnown RBP6□□□□□ -1.45
SPTLC2-204ENST00000556264 BSNDQ8WZ55 320 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 SRRTQ9BXP5 876 aaKnown RBP6□□□□□ -1.45
SPTLC2-204ENST00000556264 CLEC4MQ9H2X3 399 aaPredicted RBP6□□□□□ -1.45
SPTLC2-204ENST00000556264 SIRPGQ9P1W8 387 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 PPT2Q9UMR5 302 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 R3HCC1Q9Y3T6 440 aaKnown RBP6□□□□□ -1.45
SPTLC2-204ENST00000556264 ROBO2Q9HCK4 1378 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 SBNO2Q9Y2G9 1366 aa6□□□□□ -1.45
SPTLC2-204ENST00000556264 GPR25O00155 361 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 U2SURPO15042 1029 aaKnown RBP5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 CPB1P15086 417 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 BMP6P22004 513 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 MCM4P33991 863 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 PCDH1Q08174 1060 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 RAB33AQ14088 237 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 ZNF423Q2M1K9 1284 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 RASIP1Q5U651 963 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 EGFLAMQ63HQ2 1017 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 FOXR1Q6PIV2 292 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 CCDC84Q86UT8 332 aaPredicted RBP5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 MICALL1Q8N3F8 863 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 MKL1Q969V6 931 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 TRERF1Q96PN7 1200 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 SRPK1Q96SB4 655 aaKnown RBP5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 MIR1-1HGQ9H1L0 117 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 PRKAG3Q9UGI9 489 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 SAMM50Q9Y512 469 aa5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 MRPL42Q9Y6G3 142 aaKnown RBP5.99□□□□□ -1.45
SPTLC2-204ENST00000556264 SMAD7O15105 426 aaKnown RBP5.98□□□□□ -1.45
SPTLC2-204ENST00000556264 NME2P22392 152 aa5.98□□□□□ -1.45
SPTLC2-204ENST00000556264 PCBP4P57723 403 aaKnown RBP5.98□□□□□ -1.45
SPTLC2-204ENST00000556264 SEPT6Q14141 434 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms