RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 HIP1O00291 1037 aa14.56□□□□□ -0.08
APEX1-212ENST00000556054 EIF5BO60841 1220 aaKnown RBP14.56□□□□□ -0.08
APEX1-212ENST00000556054 ZAP70P43403 619 aa14.56□□□□□ -0.08
APEX1-212ENST00000556054 DICER1Q9UPY3 1922 aaKnown RBP14.55□□□□□ -0.08
APEX1-212ENST00000556054 RIMBP2O15034 1052 aa14.55□□□□□ -0.08
APEX1-212ENST00000556054 CYP2E1P05181 493 aaPredicted RBP14.55□□□□□ -0.08
APEX1-212ENST00000556054 FKBP1AP62942 108 aaKnown RBP14.55□□□□□ -0.08
APEX1-212ENST00000556054 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
APEX1-212ENST00000556054 TBC1D22AQ8WUA7 517 aa14.55□□□□□ -0.08
APEX1-212ENST00000556054 GPR101Q96P66 508 aaPredicted RBP14.55□□□□□ -0.08
APEX1-212ENST00000556054 SUGT1Q9Y2Z0 365 aa14.55□□□□□ -0.08
APEX1-212ENST00000556054 GOLIM4O00461 696 aa14.54□□□□□ -0.08
APEX1-212ENST00000556054 PPIP5K2O43314 1243 aa14.54□□□□□ -0.08
APEX1-212ENST00000556054 CDC45O75419 566 aa14.54□□□□□ -0.08
APEX1-212ENST00000556054 FRAT2O75474 233 aaPredicted RBP14.54□□□□□ -0.08
APEX1-212ENST00000556054 ZFYP08048 801 aaPredicted RBP14.54□□□□□ -0.08
APEX1-212ENST00000556054 IARSP41252 1262 aaKnown RBP14.54□□□□□ -0.08
APEX1-212ENST00000556054 SPTY2D1Q68D10 685 aaPredicted RBP14.54□□□□□ -0.08
APEX1-212ENST00000556054 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
APEX1-212ENST00000556054 RILPL2Q969X0 211 aa14.54□□□□□ -0.08
APEX1-212ENST00000556054 DNAJC2Q99543 621 aaKnown RBP14.54□□□□□ -0.08
APEX1-212ENST00000556054 SBF1O95248 1867 aa14.54□□□□□ -0.08
APEX1-212ENST00000556054 CCDC88AQ3V6T2 1871 aa14.54□□□□□ -0.08
APEX1-212ENST00000556054 MYO5AQ9Y4I1 1855 aaKnown RBP14.53□□□□□ -0.08
APEX1-212ENST00000556054 COL1A1P02452 1464 aaPredicted RBP14.53□□□□□ -0.08
APEX1-212ENST00000556054 G3V3G9 751 aa14.53□□□□□ -0.08
APEX1-212ENST00000556054 AOC3Q16853 763 aa14.53□□□□□ -0.08
APEX1-212ENST00000556054 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
APEX1-212ENST00000556054 STRIP1Q5VSL9 837 aa14.53□□□□□ -0.08
APEX1-212ENST00000556054 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.53□□□□□ -0.08
APEX1-212ENST00000556054 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
APEX1-212ENST00000556054 ZNF646O15015 1829 aaPredicted RBP14.52□□□□□ -0.08
APEX1-212ENST00000556054 ECE2O60344 883 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 CHMLP26374 656 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 CASC1Q6TDU7 716 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 PI16Q6UXB8 463 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 LARGE2Q8N3Y3 721 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 ANTXR1Q9H6X2 564 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 ZNF277Q9NRM2 450 aaPredicted RBP14.52□□□□□ -0.09
APEX1-212ENST00000556054 ZNRF3Q9ULT6 936 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 SCN9AQ15858 1988 aa14.52□□□□□ -0.09
APEX1-212ENST00000556054 GRIN3BO60391 1043 aa14.51□□□□□ -0.09
APEX1-212ENST00000556054 MMP14P50281 582 aa14.51□□□□□ -0.09
APEX1-212ENST00000556054 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
APEX1-212ENST00000556054 UBE3CQ15386 1083 aa14.51□□□□□ -0.09
APEX1-212ENST00000556054 DOK7Q18PE1 504 aa14.51□□□□□ -0.09
APEX1-212ENST00000556054 NIM1KQ8IY84 436 aa14.51□□□□□ -0.09
APEX1-212ENST00000556054 EDC3Q96F86 508 aaKnown RBP14.51□□□□□ -0.09
APEX1-212ENST00000556054 FSD1Q9BTV5 496 aa14.51□□□□□ -0.09
APEX1-212ENST00000556054 PIH1D3Q9NQM4 214 aaKnown RBP14.51□□□□□ -0.09
APEX1-212ENST00000556054 IQSEC3Q9UPP2 1182 aaPredicted RBP14.51□□□□□ -0.09
APEX1-212ENST00000556054 USP17L3A6NCW0 530 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 USP17L4A6NCW7 530 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 RNF113AO15541 343 aaKnown RBP14.5□□□□□ -0.09
APEX1-212ENST00000556054 MAP4K4O95819 1239 aaPredicted RBP14.5□□□□□ -0.09
APEX1-212ENST00000556054 YBX3P16989 372 aaKnown RBP eCLIP14.5□□□□□ -0.096e-9■■□□□ 12.2
APEX1-212ENST00000556054 LMNB1P20700 586 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 C8orf34Q49A92 452 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 TTLL5Q6EMB2 1281 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 TBC1D9Q6ZT07 1266 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 ARHGAP27Q6ZUM4 889 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 USP17L1Q7RTZ2 530 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 RUFY2Q8WXA3 655 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 JDP2Q8WYK2 163 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 MRIQ9BWK5 157 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 DBNDD1Q9H9R9 158 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 NDUFB9Q9Y6M9 179 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 MAST2Q6P0Q8 1798 aa14.5□□□□□ -0.09
APEX1-212ENST00000556054 MYO3BQ8WXR4 1341 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 RAD50Q92878 1312 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 EPB41L2O43491 1005 aaKnown RBP14.49□□□□□ -0.09
APEX1-212ENST00000556054 ADD2P35612 726 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 GTF2IP78347 998 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 HELLSQ9NRZ9 838 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 DIAPH3Q9NSV4 1193 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 LRP2BPQ9P2M1 347 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 COL4A5P29400 1685 aa14.49□□□□□ -0.09
APEX1-212ENST00000556054 YDJCA8MPS7 323 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 FZD9O00144 591 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 LDHBP07195 334 aaKnown RBP14.48□□□□□ -0.09
APEX1-212ENST00000556054 VIL1P09327 827 aaKnown RBP14.48□□□□□ -0.09
APEX1-212ENST00000556054 CHAF1AQ13111 956 aaPredicted RBP14.48□□□□□ -0.09
APEX1-212ENST00000556054 MFSD14BQ5SR56 506 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 ZMYM1Q5SVZ6 1142 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 DACT2Q5SW24 774 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 FAM163AQ96GL9 167 aaPredicted RBP14.48□□□□□ -0.09
APEX1-212ENST00000556054 BACH2Q9BYV9 841 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 ABCF2Q9UG63 623 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 WWC3Q9ULE0 1092 aa14.48□□□□□ -0.09
APEX1-212ENST00000556054 MAST3O60307 1309 aa14.47□□□□□ -0.09
APEX1-212ENST00000556054 TCRBV5S4A2TA0A5A2 114 aa14.47□□□□□ -0.09
APEX1-212ENST00000556054 IDH1O75874 414 aaKnown RBP14.47□□□□□ -0.09
APEX1-212ENST00000556054 LDHCP07864 332 aa14.47□□□□□ -0.09
APEX1-212ENST00000556054 PDE6AP16499 860 aa14.47□□□□□ -0.09
APEX1-212ENST00000556054 GSTO1P78417 241 aa14.47□□□□□ -0.09
APEX1-212ENST00000556054 HDLBPQ00341 1268 aaKnown RBP14.47□□□□□ -0.09
APEX1-212ENST00000556054 TNIP1Q15025 636 aa14.47□□□□□ -0.09
APEX1-212ENST00000556054 SLC9C2Q5TAH2 1124 aa14.47□□□□□ -0.09
APEX1-212ENST00000556054 SLF2Q8IX21 1173 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms