RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 CLIC6Q96NY7 704 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 NEMFO60524 1076 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 CDC25BP30305 580 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 KCNH5Q8NCM2 988 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 MYL10Q9BUA6 226 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 COPRSQ9NQ92 184 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 TPM4P67936 248 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 PHKBQ93100 1093 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 MORC2Q9Y6X9 1032 aaPredicted RBP20.6■□□□□ 0.89
RCCD1-204ENST00000555737 MAST3O60307 1309 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 FMN2Q9NZ56 1722 aa20.6■□□□□ 0.89
RCCD1-204ENST00000555737 KIF28PB7ZC32 967 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 PRC1O43663 620 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 PNOCQ13519 176 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 TSGA10IPQ3SY00 556 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 RALYLQ86SE5 291 aaKnown RBP20.59■□□□□ 0.89
RCCD1-204ENST00000555737 UBXN4Q92575 508 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 CCDC34Q96HJ3 373 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 DIP2AQ14689 1571 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 UBE2Q2LH0YL09 131 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 CAVIN2O95810 425 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 RFX5P48382 616 aaPredicted RBP20.59■□□□□ 0.89
RCCD1-204ENST00000555737 OSBP2Q969R2 916 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 CARD6Q9BX69 1037 aa20.59■□□□□ 0.89
RCCD1-204ENST00000555737 TMEM232C9JQI7 657 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 FANCCQ00597 558 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 LINC00301Q8NCQ3 95 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 PFKFB1P16118 471 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 CLCN6P51797 869 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 UBASH3AP57075 661 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 TTLL7Q6ZT98 887 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 CREBRFQ8IUR6 639 aa20.58■□□□□ 0.89
RCCD1-204ENST00000555737 ZCCHC17Q9NP64 241 aaKnown RBP20.58■□□□□ 0.89
RCCD1-204ENST00000555737 A0A1B0GUL7 405 aa20.58■□□□□ 0.88
RCCD1-204ENST00000555737 HMGB1P09429 215 aaKnown RBP20.58■□□□□ 0.88
RCCD1-204ENST00000555737 GSDMDP57764 484 aa20.58■□□□□ 0.88
RCCD1-204ENST00000555737 MICU3Q86XE3 530 aa20.58■□□□□ 0.88
RCCD1-204ENST00000555737 BBXQ8WY36 941 aaPredicted RBP20.58■□□□□ 0.88
RCCD1-204ENST00000555737 CDK11BP21127 795 aaKnown RBP20.57■□□□□ 0.88
RCCD1-204ENST00000555737 ADORA1P30542 326 aa20.57■□□□□ 0.88
RCCD1-204ENST00000555737 NOL10Q9BSC4 688 aaKnown RBP20.57■□□□□ 0.88
RCCD1-204ENST00000555737 ADALQ6DHV7 355 aa20.57■□□□□ 0.88
RCCD1-204ENST00000555737 INCENPQ9NQS7 918 aa20.57■□□□□ 0.88
RCCD1-204ENST00000555737 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
RCCD1-204ENST00000555737 TEX35Q5T0J7 233 aa20.56■□□□□ 0.88
RCCD1-204ENST00000555737 LLPHQ9BRT6 129 aaKnown RBP20.56■□□□□ 0.88
RCCD1-204ENST00000555737 TOMM22Q9NS69 142 aa20.56■□□□□ 0.88
RCCD1-204ENST00000555737 ZNF827Q17R98 1081 aa20.56■□□□□ 0.88
RCCD1-204ENST00000555737 MYSM1Q5VVJ2 828 aa20.56■□□□□ 0.88
RCCD1-204ENST00000555737 SLC52A2Q9HAB3 445 aa20.56■□□□□ 0.88
RCCD1-204ENST00000555737 WDHD1O75717 1129 aaPredicted RBP20.55■□□□□ 0.88
RCCD1-204ENST00000555737 A1BGP04217 495 aa20.55■□□□□ 0.88
RCCD1-204ENST00000555737 GYS2P54840 703 aa20.55■□□□□ 0.88
RCCD1-204ENST00000555737 EXOSC10Q01780 885 aaKnown RBP20.55■□□□□ 0.88
RCCD1-204ENST00000555737 GABPB1Q06547 395 aaPredicted RBP20.55■□□□□ 0.88
RCCD1-204ENST00000555737 TTC39AQ5SRH9 613 aa20.55■□□□□ 0.88
RCCD1-204ENST00000555737 ALDH8A1Q9H2A2 487 aaPredicted RBP20.55■□□□□ 0.88
RCCD1-204ENST00000555737 SYKP43405 635 aa20.55■□□□□ 0.88
RCCD1-204ENST00000555737 ARHGEF25Q86VW2 580 aa20.55■□□□□ 0.88
RCCD1-204ENST00000555737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.55■□□□□ 0.884e-7■■□□□ 13.7
RCCD1-204ENST00000555737 KARSQ15046 597 aaKnown RBP20.54■□□□□ 0.88
RCCD1-204ENST00000555737 NFXL1Q6ZNB6 911 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 TRMT44Q8IYL2 757 aaKnown RBP20.54■□□□□ 0.88
RCCD1-204ENST00000555737 CPLX3Q8WVH0 158 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 NALCNQ8IZF0 1738 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 FOXN1O15353 648 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 RNF113AO15541 343 aaKnown RBP20.54■□□□□ 0.88
RCCD1-204ENST00000555737 CABP4P57796 275 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 NEK11Q8NG66 645 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 DESI2Q9BSY9 194 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 ERBB3P21860 1342 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 FGAP02671 866 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
RCCD1-204ENST00000555737 ADKP55263 362 aaKnown RBP20.54■□□□□ 0.88
RCCD1-204ENST00000555737 IMMTQ16891 758 aaKnown RBP20.54■□□□□ 0.88
RCCD1-204ENST00000555737 FANCLQ9NW38 375 aa20.54■□□□□ 0.88
RCCD1-204ENST00000555737 AGLP35573 1532 aa20.53■□□□□ 0.88
RCCD1-204ENST00000555737 TATP17735 454 aaPredicted RBP20.53■□□□□ 0.88
RCCD1-204ENST00000555737 GNG11P61952 73 aa20.53■□□□□ 0.88
RCCD1-204ENST00000555737 SCARF1Q14162 830 aa20.53■□□□□ 0.88
RCCD1-204ENST00000555737 SYCP1Q15431 976 aa20.53■□□□□ 0.88
RCCD1-204ENST00000555737 ANO1Q5XXA6 986 aa20.53■□□□□ 0.88
RCCD1-204ENST00000555737 TMCO3Q6UWJ1 677 aa20.53■□□□□ 0.88
RCCD1-204ENST00000555737 MROH7-TTC4A0A0A0MT08 1334 aa20.53■□□□□ 0.88
RCCD1-204ENST00000555737 TOP1P11387 765 aaKnown RBP20.52■□□□□ 0.88
RCCD1-204ENST00000555737 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.88
RCCD1-204ENST00000555737 ZMYM1Q5SVZ6 1142 aa20.52■□□□□ 0.88
RCCD1-204ENST00000555737 CMTR1Q8N1G2 835 aaKnown RBP20.52■□□□□ 0.88
RCCD1-204ENST00000555737 PUS7LQ9H0K6 701 aaKnown RBP20.52■□□□□ 0.88
RCCD1-204ENST00000555737 UTYO14607 1347 aa20.52■□□□□ 0.88
RCCD1-204ENST00000555737 BMS1Q14692 1282 aaKnown RBP20.52■□□□□ 0.87
RCCD1-204ENST00000555737 CCDC150Q8NCX0 1101 aa20.52■□□□□ 0.87
RCCD1-204ENST00000555737 FBXO18Q8NFZ0 1043 aa20.52■□□□□ 0.87
RCCD1-204ENST00000555737 KCNG4Q8TDN1 519 aa20.52■□□□□ 0.87
RCCD1-204ENST00000555737 ALG1Q9BT22 464 aa20.52■□□□□ 0.87
RCCD1-204ENST00000555737 SENP2Q9HC62 589 aa20.52■□□□□ 0.87
RCCD1-204ENST00000555737 CEP126Q9P2H0 1117 aa20.52■□□□□ 0.87
RCCD1-204ENST00000555737 RRP12Q5JTH9 1297 aaKnown RBP20.51■□□□□ 0.87
RCCD1-204ENST00000555737 GRAMD1CQ8IYS0 662 aa20.51■□□□□ 0.87
RCCD1-204ENST00000555737 COBLO75128 1261 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms