RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 MRPS5P82675 430 aaKnown RBP15.53■□□□□ 0.08
ABCD4-222ENST00000555617 C9orf50Q5SZB4 431 aa15.53■□□□□ 0.08
ABCD4-222ENST00000555617 NECTIN2Q92692 538 aa15.53■□□□□ 0.08
ABCD4-222ENST00000555617 PHOX2BQ99453 314 aa15.53■□□□□ 0.08
ABCD4-222ENST00000555617 ELP3Q9H9T3 547 aa15.53■□□□□ 0.08
ABCD4-222ENST00000555617 EPG5Q9HCE0 2579 aa15.53■□□□□ 0.08
ABCD4-222ENST00000555617 GPR37L1O60883 481 aa15.52■□□□□ 0.08
ABCD4-222ENST00000555617 SHHQ15465 462 aa15.52■□□□□ 0.08
ABCD4-222ENST00000555617 TTLL7Q6ZT98 887 aa15.52■□□□□ 0.08
ABCD4-222ENST00000555617 CPA4Q9UI42 421 aa15.52■□□□□ 0.08
ABCD4-222ENST00000555617 DCHS1Q96JQ0 3298 aa15.51■□□□□ 0.07
ABCD4-222ENST00000555617 DOCK3Q8IZD9 2030 aa15.51■□□□□ 0.07
ABCD4-222ENST00000555617 USP2O75604 605 aaPredicted RBP15.51■□□□□ 0.07
ABCD4-222ENST00000555617 BMP1P13497 986 aa15.51■□□□□ 0.07
ABCD4-222ENST00000555617 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
ABCD4-222ENST00000555617 C17orf99Q6UX52 265 aa15.51■□□□□ 0.07
ABCD4-222ENST00000555617 ZNF34Q8IZ26 560 aa15.51■□□□□ 0.07
ABCD4-222ENST00000555617 MAST2Q6P0Q8 1798 aa15.51■□□□□ 0.07
ABCD4-222ENST00000555617 NGEFQ8N5V2 710 aa15.5■□□□□ 0.07
ABCD4-222ENST00000555617 SLAIN1Q8ND83 568 aa15.5■□□□□ 0.07
ABCD4-222ENST00000555617 TBC1D16Q8TBP0 767 aa15.5■□□□□ 0.07
ABCD4-222ENST00000555617 COL26A1Q96A83 441 aa15.5■□□□□ 0.07
ABCD4-222ENST00000555617 MAP3K15Q6ZN16 1313 aa15.49■□□□□ 0.07
ABCD4-222ENST00000555617 FMNL1O95466 1100 aaPredicted RBP15.49■□□□□ 0.07
ABCD4-222ENST00000555617 HCLS1P14317 486 aaPredicted RBP15.49■□□□□ 0.07
ABCD4-222ENST00000555617 NBPF3Q9H094 633 aa15.49■□□□□ 0.07
ABCD4-222ENST00000555617 C11orf49Q9H6J7 331 aa15.49■□□□□ 0.07
ABCD4-222ENST00000555617 CHD8Q9HCK8 2581 aa15.48■□□□□ 0.07
ABCD4-222ENST00000555617 ECM29Q5VYK3 1845 aa15.48■□□□□ 0.07
ABCD4-222ENST00000555617 IL13P35225 146 aa15.48■□□□□ 0.07
ABCD4-222ENST00000555617 FOXK2Q01167 660 aa15.48■□□□□ 0.07
ABCD4-222ENST00000555617 CELF1Q92879 486 aaKnown RBP15.48■□□□□ 0.07
ABCD4-222ENST00000555617 DEFB129Q9H1M3 183 aa15.48■□□□□ 0.07
ABCD4-222ENST00000555617 ZBTB3Q9H5J0 574 aa15.48■□□□□ 0.07
ABCD4-222ENST00000555617 COL1A1P02452 1464 aaPredicted RBP15.47■□□□□ 0.07
ABCD4-222ENST00000555617 BTBD19C9JJ37 291 aa15.47■□□□□ 0.07
ABCD4-222ENST00000555617 ADCY3O60266 1144 aa15.47■□□□□ 0.07
ABCD4-222ENST00000555617 SMAD3P84022 425 aaKnown RBP15.47■□□□□ 0.07
ABCD4-222ENST00000555617 LRRC26Q2I0M4 334 aa15.47■□□□□ 0.07
ABCD4-222ENST00000555617 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
ABCD4-222ENST00000555617 APOBEC3FQ8IUX4 373 aaKnown RBP15.47■□□□□ 0.07
ABCD4-222ENST00000555617 ERVV-1B6SEH8 477 aa15.46■□□□□ 0.07
ABCD4-222ENST00000555617 SMIM22K7EJ46 135 aa15.46■□□□□ 0.07
ABCD4-222ENST00000555617 HMOX1P09601 288 aa15.46■□□□□ 0.07
ABCD4-222ENST00000555617 TEFQ10587 303 aa15.46■□□□□ 0.07
ABCD4-222ENST00000555617 ZBED3Q96IU2 234 aaPredicted RBP15.46■□□□□ 0.07
ABCD4-222ENST00000555617 FBXL18Q96ME1 805 aa15.46■□□□□ 0.07
ABCD4-222ENST00000555617 CHD9Q3L8U1 2897 aa15.46■□□□□ 0.06
ABCD4-222ENST00000555617 ZNF318Q5VUA4 2279 aa15.45■□□□□ 0.06
ABCD4-222ENST00000555617 PPP1R12BO60237 982 aaPredicted RBP15.45■□□□□ 0.06
ABCD4-222ENST00000555617 HOXD10P28358 340 aa15.45■□□□□ 0.06
ABCD4-222ENST00000555617 KCNQ1P51787 676 aa15.45■□□□□ 0.06
ABCD4-222ENST00000555617 TFF2Q03403 129 aa15.45■□□□□ 0.06
ABCD4-222ENST00000555617 DDX46Q7L014 1031 aaKnown RBP15.45■□□□□ 0.06
ABCD4-222ENST00000555617 ANKLE1Q8NAG6 615 aa15.45■□□□□ 0.06
ABCD4-222ENST00000555617 SIN3AQ96ST3 1273 aa15.45■□□□□ 0.06
ABCD4-222ENST00000555617 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.45■□□□□ 0.069e-6■■□□□ 13.2
ABCD4-222ENST00000555617 AOX1Q06278 1338 aa15.44■□□□□ 0.06
ABCD4-222ENST00000555617 ANKRD13AQ8IZ07 590 aa15.44■□□□□ 0.06
ABCD4-222ENST00000555617 ZBTB38Q8NAP3 1195 aaPredicted RBP15.44■□□□□ 0.06
ABCD4-222ENST00000555617 EYA3Q99504 573 aa15.44■□□□□ 0.06
ABCD4-222ENST00000555617 PCDHAC2Q9Y5I4 1007 aa15.44■□□□□ 0.06
ABCD4-222ENST00000555617 UNCXA6NJT0 531 aa15.43■□□□□ 0.06
ABCD4-222ENST00000555617 GTF2A2P52657 109 aa15.43■□□□□ 0.06
ABCD4-222ENST00000555617 CCDC85BQ15834 202 aaPredicted RBP15.43■□□□□ 0.06
ABCD4-222ENST00000555617 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.43■□□□□ 0.06
ABCD4-222ENST00000555617 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
ABCD4-222ENST00000555617 IL27Q8NEV9 243 aa15.42■□□□□ 0.06
ABCD4-222ENST00000555617 ZC3H12CQ9C0D7 883 aaKnown RBP15.42■□□□□ 0.06
ABCD4-222ENST00000555617 LRRC37A2A6NM11 1700 aa15.42■□□□□ 0.06
ABCD4-222ENST00000555617 USP17L3A6NCW0 530 aa15.41■□□□□ 0.06
ABCD4-222ENST00000555617 USP17L4A6NCW7 530 aa15.41■□□□□ 0.06
ABCD4-222ENST00000555617 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
ABCD4-222ENST00000555617 IREB2P48200 963 aaKnown RBP15.41■□□□□ 0.06
ABCD4-222ENST00000555617 FLT3LGP49771 235 aa15.41■□□□□ 0.06
ABCD4-222ENST00000555617 USP17L1Q7RTZ2 530 aa15.41■□□□□ 0.06
ABCD4-222ENST00000555617 CDAN1Q8IWY9 1227 aa15.41■□□□□ 0.06
ABCD4-222ENST00000555617 ANKS1AQ92625 1134 aa15.41■□□□□ 0.06
ABCD4-222ENST00000555617 CEMIPQ8WUJ3 1361 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 COL6A1P12109 1028 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 CAPN2P17655 700 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 ADGRE1Q14246 886 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 DACT2Q5SW24 774 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 TMC4Q7Z404 712 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 PPP1R42Q7Z4L9 355 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 UTP14AQ9BVJ6 771 aaKnown RBP15.4■□□□□ 0.06
ABCD4-222ENST00000555617 ATRXP46100 2492 aa15.4■□□□□ 0.06
ABCD4-222ENST00000555617 TRIM32Q13049 653 aa15.39■□□□□ 0.05
ABCD4-222ENST00000555617 VGLL4Q14135 290 aa15.39■□□□□ 0.05
ABCD4-222ENST00000555617 PDE3AQ14432 1141 aa15.39■□□□□ 0.05
ABCD4-222ENST00000555617 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
ABCD4-222ENST00000555617 ST18O60284 1047 aa15.38■□□□□ 0.05
ABCD4-222ENST00000555617 UFL1O94874 794 aa15.38■□□□□ 0.05
ABCD4-222ENST00000555617 HELBQ8NG08 1087 aaPredicted RBP15.38■□□□□ 0.05
ABCD4-222ENST00000555617 LBHD1Q9BQE6 289 aaPredicted RBP15.38■□□□□ 0.05
ABCD4-222ENST00000555617 CFAP47Q6ZTR5 3102 aa15.38■□□□□ 0.05
ABCD4-222ENST00000555617 AK9Q5TCS8 1911 aa15.37■□□□□ 0.05
ABCD4-222ENST00000555617 G3V3G9 751 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms