RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 PDIA3P30101 505 aaKnown RBP25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 CCDC152Q4G0S7 254 aa25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 TTLL5Q6EMB2 1281 aa25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 NCOA7Q8NI08 942 aa25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 UBAP1LF5GYI3 381 aa25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 ZNF213O14771 459 aa25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 TOM1O60784 492 aa25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 ZNF652Q9Y2D9 606 aa25.03■■□□□ 1.6
ARHGEF40-204ENST00000555038 DDX60Q8IY21 1712 aaKnown RBP25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 DTNBO60941 627 aa25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 SLC9C2Q5TAH2 1124 aa25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 PI16Q6UXB8 463 aa25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 MB21D2Q8IYB1 491 aaPredicted RBP25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 RNF214Q8ND24 703 aa25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 RGS22Q8NE09 1264 aa25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 LEO1Q8WVC0 666 aaPredicted RBP25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 FUCA2Q9BTY2 467 aa25.02■■□□□ 1.6
ARHGEF40-204ENST00000555038 ZMYM6O95789 1325 aa25.01■■□□□ 1.59
ARHGEF40-204ENST00000555038 COL5A3P25940 1745 aaPredicted RBP25.01■■□□□ 1.59
ARHGEF40-204ENST00000555038 DHX16O60231 1041 aaKnown RBP25.01■■□□□ 1.59
ARHGEF40-204ENST00000555038 CTDNEP1O95476 244 aa25.01■■□□□ 1.59
ARHGEF40-204ENST00000555038 MPHOSPH8Q99549 860 aa25.01■■□□□ 1.59
ARHGEF40-204ENST00000555038 A0A0G2JLW4 131 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 GOLGA6L4A6NEF3 574 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 ITPK1Q13572 414 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 RALYLQ86SE5 291 aaKnown RBP25■■□□□ 1.59
ARHGEF40-204ENST00000555038 ACSBG1Q96GR2 724 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 DDX19AQ9NUU7 478 aaKnown RBP25■■□□□ 1.59
ARHGEF40-204ENST00000555038 BCORQ6W2J9 1755 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 NTSR2O95665 410 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 PHKA1P46020 1223 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 CLEC4GQ6UXB4 293 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 DDX11Q96FC9 970 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 PIH1D3Q9NQM4 214 aaKnown RBP25■■□□□ 1.59
ARHGEF40-204ENST00000555038 CCDC39Q9UFE4 941 aa25■■□□□ 1.59
ARHGEF40-204ENST00000555038 DOCK2Q92608 1830 aa24.99■■□□□ 1.59
ARHGEF40-204ENST00000555038 PRC1O43663 620 aa24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 HCLS1P14317 486 aaPredicted RBP24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 PDE6AP16499 860 aa24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 IGHMBP2P38935 993 aaKnown RBP24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 ALX1Q15699 326 aa24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 FAM173BQ6P4H8 233 aa24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 NOL7Q9UMY1 257 aaKnown RBP24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 MYH14Q7Z406 1995 aaKnown RBP24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 MSNP26038 577 aaKnown RBP24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 TRDNQ13061 729 aa24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 SPATA5Q8NB90 893 aa24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 NUP62CLQ9H1M0 184 aa24.98■■□□□ 1.59
ARHGEF40-204ENST00000555038 MYH15Q9Y2K3 1946 aa24.97■■□□□ 1.59
ARHGEF40-204ENST00000555038 TCRBV5S4A2TA0A5A2 114 aa24.97■■□□□ 1.59
ARHGEF40-204ENST00000555038 IDH1O75874 414 aaKnown RBP24.97■■□□□ 1.59
ARHGEF40-204ENST00000555038 CCDC192P0DO97 292 aa24.97■■□□□ 1.59
ARHGEF40-204ENST00000555038 NIP7Q9Y221 180 aaKnown RBP eCLIP24.97■■□□□ 1.59
ARHGEF40-204ENST00000555038 ZNF532Q9HCE3 1301 aa24.97■■□□□ 1.59
ARHGEF40-204ENST00000555038 HAND2P61296 217 aa24.96■■□□□ 1.59
ARHGEF40-204ENST00000555038 CCT2P78371 535 aaKnown RBP24.96■■□□□ 1.59
ARHGEF40-204ENST00000555038 MAP3K12Q12852 859 aa24.96■■□□□ 1.59
ARHGEF40-204ENST00000555038 A0A0G2JS52 829 aa24.95■■□□□ 1.59
ARHGEF40-204ENST00000555038 MAP3K11Q16584 847 aa24.95■■□□□ 1.59
ARHGEF40-204ENST00000555038 ZNF396Q96N95 335 aaPredicted RBP24.95■■□□□ 1.59
ARHGEF40-204ENST00000555038 CARMIL3Q8ND23 1372 aa24.95■■□□□ 1.58
ARHGEF40-204ENST00000555038 GIMAP6Q6P9H5 292 aa24.95■■□□□ 1.58
ARHGEF40-204ENST00000555038 TFIP11Q9UBB9 837 aaKnown RBP24.95■■□□□ 1.58
ARHGEF40-204ENST00000555038 PIP4K2BP78356 416 aa24.94■■□□□ 1.58
ARHGEF40-204ENST00000555038 CHST3Q7LGC8 479 aa24.94■■□□□ 1.58
ARHGEF40-204ENST00000555038 CDC5LQ99459 802 aaKnown RBP24.94■■□□□ 1.58
ARHGEF40-204ENST00000555038 NUTM2BA6NNL0 878 aaPredicted RBP24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 NUTM2EB1AL46 878 aaPredicted RBP24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 ANTXR2P58335 489 aa24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 RBM43Q6ZSC3 357 aaKnown RBP24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 NUTM2AQ8IVF1 878 aaPredicted RBP24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 AIDAQ96BJ3 306 aa24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 STRBPQ96SI9 672 aaKnown RBP24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 NCOA5Q9HCD5 579 aaKnown RBP24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 RCOR1Q9UKL0 485 aa24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 NAP1L2Q9ULW6 460 aaPredicted RBP24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 KLF18A0A0U1RQI7 1052 aa24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 LIG1P18858 919 aa24.93■■□□□ 1.58
ARHGEF40-204ENST00000555038 ADD1P35611 737 aaKnown RBP24.92■■□□□ 1.58
ARHGEF40-204ENST00000555038 RASGRF1Q13972 1273 aa24.92■■□□□ 1.58
ARHGEF40-204ENST00000555038 HELBQ8NG08 1087 aaPredicted RBP24.92■■□□□ 1.58
ARHGEF40-204ENST00000555038 CLSTN2Q9H4D0 955 aa24.92■■□□□ 1.58
ARHGEF40-204ENST00000555038 SEC31BQ9NQW1 1179 aa24.92■■□□□ 1.58
ARHGEF40-204ENST00000555038 WWC3Q9ULE0 1092 aa24.92■■□□□ 1.58
ARHGEF40-204ENST00000555038 GNAT2P19087 354 aa24.91■■□□□ 1.58
ARHGEF40-204ENST00000555038 TMEM87BQ96K49 555 aa24.91■■□□□ 1.58
ARHGEF40-204ENST00000555038 CNTNAP4Q9C0A0 1308 aa24.91■■□□□ 1.58
ARHGEF40-204ENST00000555038 ZKSCAN5Q9Y2L8 839 aa24.91■■□□□ 1.58
ARHGEF40-204ENST00000555038 MYO5AQ9Y4I1 1855 aaKnown RBP24.91■■□□□ 1.58
ARHGEF40-204ENST00000555038 GOLGA8BA8MQT2 603 aa24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 PATL2C9JE40 543 aaKnown RBP24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 PGBD1Q96JS3 809 aa24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 TNMDQ9H2S6 317 aa24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 DACT1Q9NYF0 836 aa24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 ANGEL1Q9UNK9 670 aaKnown RBP24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 HPS5Q9UPZ3 1129 aa24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 FDPSP14324 419 aaKnown RBP24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 VPS72Q15906 364 aa24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 TPRNQ4KMQ1 711 aa24.9■■□□□ 1.58
ARHGEF40-204ENST00000555038 BICD2Q8TD16 824 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms