RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	ADAM19	Q9H013	955 aa		8.96	□□□□□ -0.98
PSMC6-208	ENST00000554956	PROC	P04070	461 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	GALNT11	Q8NCW6	608 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	ASAP3	Q8TDY4	903 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	CCDC74A	Q96AQ1	378 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	ASB16	Q96NS5	453 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	SPOCK3	Q9BQ16	436 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	BHLHE41	Q9C0J9	482 aa	Predicted RBP	8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	SOX13	Q9UN79	622 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	SOGA1	O94964	1423 aa		8.95	□□□□□ -0.98
PSMC6-208	ENST00000554956	PRDM2	Q13029	1718 aa		8.94	□□□□□ -0.98
PSMC6-208	ENST00000554956	PI16	Q6UXB8	463 aa		8.94	□□□□□ -0.98
PSMC6-208	ENST00000554956	CACTIN-AS1	Q8N1I8	211 aa		8.94	□□□□□ -0.98
PSMC6-208	ENST00000554956	DNAJC25	Q9H1X3	360 aa		8.94	□□□□□ -0.98
PSMC6-208	ENST00000554956	PNMA6F	A0A0J9YX94	578 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	DLL1	O00548	723 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	PLCB3	Q01970	1234 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	HGSNAT	Q68CP4	663 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	EPS8L3	Q8TE67	593 aa	Known RBP	8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	SETDB2	Q96T68	719 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	TCF12	Q99081	682 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	MUC3B	Q9H195	1237 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	LIN7B	Q9HAP6	207 aa		8.93	□□□□□ -0.98
PSMC6-208	ENST00000554956	ARAP1	Q96P48	1450 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	MSTN	O14793	375 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	FSCN2	O14926	492 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	MAPK8	P45983	427 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	GRIA4	P48058	902 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	SPRED3	Q2MJR0	410 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	VN1R5	Q7Z5H4	357 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	CCNJL	Q8IV13	435 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	NACC1	Q96RE7	527 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	GZF1	Q9H116	711 aa	Predicted RBP	8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	KCNK4	Q9NYG8	393 aa		8.92	□□□□□ -0.98
PSMC6-208	ENST00000554956	CUX1	P39880	1505 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	FGD5	Q6ZNL6	1462 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	FAM177B	A6PVY3	158 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956		H3BRJ5	948 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	TM4SF5	O14894	197 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	FMR1	Q06787	632 aa	Known RBP eCLIP	8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	MBTPS1	Q14703	1052 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	KIAA0319	Q5VV43	1072 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	FOXD4L3	Q6VB84	417 aa	Predicted RBP	8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	BSND	Q8WZ55	320 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	LENG1	Q96BZ8	264 aa	Predicted RBP	8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	EHD4	Q9H223	541 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	USP21	Q9UK80	565 aa		8.91	□□□□□ -0.98
PSMC6-208	ENST00000554956	GADD45B	O75293	160 aa	Predicted RBP	8.9	□□□□□ -0.98
PSMC6-208	ENST00000554956	CABP4	P57796	275 aa		8.9	□□□□□ -0.98
PSMC6-208	ENST00000554956	ENOX2	Q16206	610 aa	Known RBP	8.9	□□□□□ -0.98
PSMC6-208	ENST00000554956	SLC7A3	Q8WY07	619 aa		8.9	□□□□□ -0.98
PSMC6-208	ENST00000554956	SRA1	Q9HD15	236 aa	Known RBP	8.9	□□□□□ -0.98
PSMC6-208	ENST00000554956	WWC3	Q9ULE0	1092 aa		8.9	□□□□□ -0.98
PSMC6-208	ENST00000554956	SNAPC4	Q5SXM2	1469 aa		8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	C9orf172	C9J069	976 aa		8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	DDX3Y	O15523	660 aa	Known RBP	8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	WISP1	O95388	367 aa		8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	P4HB	P07237	508 aa	Known RBP	8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	ADGRE1	Q14246	886 aa		8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	FAM117B	Q6P1L5	589 aa		8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	MAP4K3	Q8IVH8	894 aa		8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956	KLHDC7B	Q96G42	594 aa		8.89	□□□□□ -0.99
PSMC6-208	ENST00000554956		A0A096LPE4	126 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956		A0A1W2PPZ6	126 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956	ADAM11	O75078	769 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956	IGHA1	P01876	353 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956	GATA4	P43694	442 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956	GRM2	Q14416	872 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956	IGF2-AS	Q6U949	168 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956	SEC31B	Q9NQW1	1179 aa		8.88	□□□□□ -0.99
PSMC6-208	ENST00000554956	SOX1	O00570	391 aa	Predicted RBP	8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	ALX3	O95076	343 aa		8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	CD68	P34810	354 aa	Predicted RBP	8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	PIP4K2B	P78356	416 aa		8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	IKBKE	Q14164	716 aa		8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	GLIS3	Q8NEA6	775 aa		8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	ABCB6	Q9NP58	842 aa		8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	CHD1	O14646	1710 aa		8.87	□□□□□ -0.99
PSMC6-208	ENST00000554956	ANKRD33B	A6NCL7	494 aa		8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	NOS3	P29474	1203 aa		8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	IREB2	P48200	963 aa	Known RBP	8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	NLRP12	P59046	1061 aa		8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	NRG1	Q02297	640 aa	Predicted RBP	8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	TXNRD3	Q86VQ6	643 aa		8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	AGGF1	Q8N302	714 aa	eCLIP	8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	UBASH3B	Q8TF42	649 aa		8.86	□□□□□ -0.99
PSMC6-208	ENST00000554956	ESRRA	P11474	423 aa	Predicted RBP	8.85	□□□□□ -0.99
PSMC6-208	ENST00000554956	DOC2B	Q14184	412 aa		8.85	□□□□□ -0.99
PSMC6-208	ENST00000554956	KLHL23	Q8NBE8	558 aa		8.85	□□□□□ -0.99
PSMC6-208	ENST00000554956	WFDC12	Q8WWY7	111 aa		8.85	□□□□□ -0.99
PSMC6-208	ENST00000554956	MRPL18	Q9H0U6	180 aa	Known RBP	8.85	□□□□□ -0.99
PSMC6-208	ENST00000554956	GRIN2B	Q13224	1484 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	PCDH1	Q08174	1060 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	C19orf57	Q0VDD7	668 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	ZNF423	Q2M1K9	1284 aa		8.84	□□□□□ -0.99
PSMC6-208	ENST00000554956	PRPF40B	Q6NWY9	871 aa	Known RBP	8.84	□□□□□ -0.99

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms