RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 USP17L3A6NCW0 530 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 USP17L4A6NCW7 530 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 GLRX3O76003 335 aaKnown RBP20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 FKBP1AP62942 108 aaKnown RBP20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 TNIP1Q15025 636 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 USP17L1Q7RTZ2 530 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 WDR66Q8TBY9 1149 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 OTUD7AQ8TE49 926 aaPredicted RBP20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 TBC1D22AQ8WUA7 517 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 IGSF3O75054 1194 aa20.06■□□□□ 0.8
SPTLC2-203ENST00000554901 MCAMP43121 646 aa20.06■□□□□ 0.8
SPTLC2-203ENST00000554901 TTLL5Q6EMB2 1281 aa20.06■□□□□ 0.8
SPTLC2-203ENST00000554901 CIAPIN1Q6FI81 312 aa20.06■□□□□ 0.8
SPTLC2-203ENST00000554901 PLEKHM2Q8IWE5 1019 aa20.06■□□□□ 0.8
SPTLC2-203ENST00000554901 SPATA5Q8NB90 893 aa20.06■□□□□ 0.8
SPTLC2-203ENST00000554901 HMG20BQ9P0W2 317 aa20.06■□□□□ 0.8
SPTLC2-203ENST00000554901 CHD4Q14839 1912 aa20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 PDE4AP27815 886 aa20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 GTF2IP78347 998 aa20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 CXCL9Q07325 125 aa20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 ZGPATQ8N5A5 531 aaKnown RBP20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 IQSEC3Q9UPP2 1182 aaPredicted RBP20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 MYO3BQ8WXR4 1341 aa20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 SALL1Q9NSC2 1324 aa20.05■□□□□ 0.8
SPTLC2-203ENST00000554901 VIL1P09327 827 aaKnown RBP20.04■□□□□ 0.8
SPTLC2-203ENST00000554901 PI4K2BQ8TCG2 481 aa20.04■□□□□ 0.8
SPTLC2-203ENST00000554901 HAUS7Q99871 368 aa20.04■□□□□ 0.8
SPTLC2-203ENST00000554901 SUGT1Q9Y2Z0 365 aa20.04■□□□□ 0.8
SPTLC2-203ENST00000554901 TIAM2Q8IVF5 1701 aa20.03■□□□□ 0.8
SPTLC2-203ENST00000554901 SCARF1Q14162 830 aa20.03■□□□□ 0.8
SPTLC2-203ENST00000554901 DACT2Q5SW24 774 aa20.03■□□□□ 0.8
SPTLC2-203ENST00000554901 GPC2Q8N158 579 aa20.03■□□□□ 0.8
SPTLC2-203ENST00000554901 PSME4Q14997 1843 aa20.03■□□□□ 0.8
SPTLC2-203ENST00000554901 COL1A1P02452 1464 aaPredicted RBP20.03■□□□□ 0.8
SPTLC2-203ENST00000554901 SCN9AQ15858 1988 aa20.02■□□□□ 0.8
SPTLC2-203ENST00000554901 RAD17O75943 681 aa20.02■□□□□ 0.8
SPTLC2-203ENST00000554901 MMP14P50281 582 aa20.02■□□□□ 0.8
SPTLC2-203ENST00000554901 DPY19L2Q6NUT2 758 aa20.02■□□□□ 0.8
SPTLC2-203ENST00000554901 KCNQ5Q9NR82 932 aa20.02■□□□□ 0.8
SPTLC2-203ENST00000554901 PSMD14O00487 310 aa20.02■□□□□ 0.79
SPTLC2-203ENST00000554901 RPS12P25398 132 aaKnown RBP20.02■□□□□ 0.79
SPTLC2-203ENST00000554901 CHAF1AQ13111 956 aaPredicted RBP20.02■□□□□ 0.79
SPTLC2-203ENST00000554901 TTF1Q15361 905 aaPredicted RBP20.02■□□□□ 0.79
SPTLC2-203ENST00000554901 RSBN1LQ6PCB5 846 aaPredicted RBP20.02■□□□□ 0.79
SPTLC2-203ENST00000554901 AGBL3Q8NEM8 1001 aa20.02■□□□□ 0.79
SPTLC2-203ENST00000554901 BOLA2Q9H3K6 86 aa20.02■□□□□ 0.79
SPTLC2-203ENST00000554901 MYH13Q9UKX3 1938 aa20.01■□□□□ 0.79
SPTLC2-203ENST00000554901 ZNF541Q9H0D2 1346 aa20.01■□□□□ 0.79
SPTLC2-203ENST00000554901 AKAP11Q9UKA4 1901 aa20.01■□□□□ 0.79
SPTLC2-203ENST00000554901 ZAP70P43403 619 aa20.01■□□□□ 0.79
SPTLC2-203ENST00000554901 MFSD14BQ5SR56 506 aa20.01■□□□□ 0.79
SPTLC2-203ENST00000554901 SPTY2D1Q68D10 685 aaPredicted RBP20.01■□□□□ 0.79
SPTLC2-203ENST00000554901 TSHZ3Q63HK5 1081 aa20■□□□□ 0.79
SPTLC2-203ENST00000554901 TMED8Q6PL24 325 aaPredicted RBP20■□□□□ 0.79
SPTLC2-203ENST00000554901 PI16Q6UXB8 463 aa20■□□□□ 0.79
SPTLC2-203ENST00000554901 FBXW7Q969H0 707 aa20■□□□□ 0.79
SPTLC2-203ENST00000554901 CYP2E1P05181 493 aaPredicted RBP19.99■□□□□ 0.79
SPTLC2-203ENST00000554901 DPF2Q92785 391 aa19.99■□□□□ 0.79
SPTLC2-203ENST00000554901 GMLQ99445 158 aa19.99■□□□□ 0.79
SPTLC2-203ENST00000554901 DNAJC2Q99543 621 aaKnown RBP19.99■□□□□ 0.79
SPTLC2-203ENST00000554901 SNRKQ9NRH2 765 aa19.99■□□□□ 0.79
SPTLC2-203ENST00000554901 PAG1Q9NWQ8 432 aa19.99■□□□□ 0.79
SPTLC2-203ENST00000554901 GLTPD2A6NH11 291 aa19.98■□□□□ 0.79
SPTLC2-203ENST00000554901 TICAM2Q86XR7 235 aa19.98■□□□□ 0.79
SPTLC2-203ENST00000554901 ZNF646O15015 1829 aaPredicted RBP19.98■□□□□ 0.79
SPTLC2-203ENST00000554901 MAST3O60307 1309 aa19.98■□□□□ 0.79
SPTLC2-203ENST00000554901 CERS5Q8N5B7 392 aa19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 JAG2Q9Y219 1238 aa19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 GJA3Q9Y6H8 435 aa19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 GOLIM4O00461 696 aa19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 LDHBP07195 334 aaKnown RBP19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 TTC22Q5TAA0 569 aa19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 L3MBTL3Q96JM7 780 aaPredicted RBP19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 ABCF2Q9UG63 623 aa19.97■□□□□ 0.79
SPTLC2-203ENST00000554901 EVI5LQ96CN4 794 aa19.96■□□□□ 0.79
SPTLC2-203ENST00000554901 MRIQ9BWK5 157 aa19.96■□□□□ 0.79
SPTLC2-203ENST00000554901 LRP2BPQ9P2M1 347 aa19.96■□□□□ 0.79
SPTLC2-203ENST00000554901 DDNO94850 711 aaPredicted RBP19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 HDLBPQ00341 1268 aaKnown RBP19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 MAP3K12Q12852 859 aa19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 LRRFIP1Q32MZ4 808 aaKnown RBP19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 CNTROBQ8N137 903 aa19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 OGFOD1Q8N543 542 aa19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 KBTBD3Q8NAB2 608 aa19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 HDAC9Q9UKV0 1011 aa19.95■□□□□ 0.78
SPTLC2-203ENST00000554901 USP17L8P0C7I0 530 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 PRDX5P30044 214 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 RGS3P49796 1198 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 GMPSP49915 693 aaPredicted RBP19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 TBC1D9Q6ZT07 1266 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 SLF2Q8IX21 1173 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 MXD3Q9BW11 206 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 ANTXR1Q9H6X2 564 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 PIH1D3Q9NQM4 214 aaKnown RBP19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 ZBTB12Q9Y330 459 aaPredicted RBP19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 NDUFB9Q9Y6M9 179 aa19.94■□□□□ 0.78
SPTLC2-203ENST00000554901 KIAA0825Q8IV33 1275 aa19.93■□□□□ 0.78
SPTLC2-203ENST00000554901 TTF2Q9UNY4 1162 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms