RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 KIF1BO60333 1816 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 TRPM2O94759 1503 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 A2MP01023 1474 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 GADD45BO75293 160 aaPredicted RBP6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 SCARF1Q14162 830 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 GRM2Q14416 872 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 TAF1CQ15572 869 aaPredicted RBP6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 ZNF654Q8IZM8 581 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 TRPM1Q7Z4N2 1603 aa6.5□□□□□ -1.37
PPP4R3A-204ENST00000554574 NEURL4Q96JN8 1562 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 DIP2CQ9Y2E4 1556 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 CFAP65Q6ZU64 1925 aaKnown RBP6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 KANK1Q14678 1352 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 FAM187AA6NFU0 413 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 F11P03951 625 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 VEGFBP49765 207 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 NBPF8Q3BBV2 869 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 SAMD5Q5TGI4 173 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 SUV39H2Q9H5I1 410 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 LATS2Q9NRM7 1088 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 DNMT3LQ9UJW3 386 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 DYRK1BQ9Y463 629 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 EFCAB6Q5THR3 1501 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 ZMYM4Q5VZL5 1548 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 LMTK2Q8IWU2 1503 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 RALGAPBQ86X10 1494 aa6.49□□□□□ -1.37
PPP4R3A-204ENST00000554574 AVPP01185 164 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 CES1P23141 567 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 ST13P50502 369 aaKnown RBP6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 NLRP8Q86W28 1048 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 FAM177A1Q8N128 213 aaPredicted RBP6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 DHX38Q92620 1227 aaKnown RBP6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 GAS2L1Q99501 681 aaPredicted RBP6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 SRCIN1Q9C0H9 1055 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 KANSL3Q9P2N6 904 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 PDZRN3Q9UPQ7 1066 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 INPP5FQ9Y2H2 1132 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 ZC3H13Q5T200 1668 aaKnown RBP6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 SPATA31E1Q6ZUB1 1445 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 LAMC1P11047 1609 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 CLTCL1P53675 1640 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 SASH3O75995 380 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 DNAJA1P31689 397 aaKnown RBP6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 PGBD3Q8N328 593 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 GLIS3Q8NEA6 775 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 ZFP42Q96MM3 310 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 DNAJC2Q99543 621 aaKnown RBP6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 PTPRTO14522 1441 aa6.48□□□□□ -1.37
PPP4R3A-204ENST00000554574 SENP3-EIF4A1A0A087X0R7 540 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 KIF3BO15066 747 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 THBS1P07996 1170 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 GNL2Q13823 731 aaKnown RBP6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 TTC39BQ5VTQ0 682 aaPredicted RBP6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 ERMP1Q7Z2K6 904 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 KRT25Q7Z3Z0 450 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 GMLQ99445 158 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 C11orf16Q9NQ32 467 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 COPRSQ9NQ92 184 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 IFT172Q9UG01 1749 aa6.47□□□□□ -1.37
PPP4R3A-204ENST00000554574 CAMSAP1Q5T5Y3 1602 aa6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 A0A1W2PP55 124 aa6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 HSPA5P11021 654 aaKnown RBP6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 KCNQ4P56696 695 aa6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 SFSWAPQ12872 951 aaKnown RBP6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 PEAR1Q5VY43 1037 aaPredicted RBP6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 C3orf58Q8NDZ4 430 aa6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 KCNH4Q9UQ05 1017 aa6.46□□□□□ -1.37
PPP4R3A-204ENST00000554574 ATP2B1P20020 1258 aa6.46□□□□□ -1.38
PPP4R3A-204ENST00000554574 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.38
PPP4R3A-204ENST00000554574 KIAA0319Q5VV43 1072 aa6.46□□□□□ -1.38
PPP4R3A-204ENST00000554574 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
PPP4R3A-204ENST00000554574 HIRIP3Q9BW71 556 aaPredicted RBP6.46□□□□□ -1.38
PPP4R3A-204ENST00000554574 REREQ9P2R6 1566 aa6.46□□□□□ -1.38
PPP4R3A-204ENST00000554574 PRAG1Q86YV5 1406 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 KIAA1210Q9ULL0 1709 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 DCDC2BA2VCK2 349 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 POTECB2RU33 542 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 EFSO43281 561 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 MMP20O60882 483 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 FAM157BP0CG42 384 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 GSTT1P30711 240 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 GTF2F1P35269 517 aaKnown RBP eCLIP6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 DDX10Q13206 875 aaKnown RBP6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 GRIN2CQ14957 1233 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 EFHC2Q5JST6 749 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 DPH6Q7L8W6 267 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 GSX2Q9BZM3 304 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 EHD4Q9H223 541 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 HCN2Q9UL51 889 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 ABCC3O15438 1527 aa6.45□□□□□ -1.38
PPP4R3A-204ENST00000554574 SMARCA5O60264 1052 aaPredicted RBP6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 RAPGEF3O95398 923 aa6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 ARID5AQ03989 594 aa6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 CCINQ13939 588 aa6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 OR13H1Q8NG92 308 aa6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 DCAF11Q8TEB1 546 aa6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 KBTBD4Q9NVX7 518 aa6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 ZFATQ9P243 1243 aa6.44□□□□□ -1.38
PPP4R3A-204ENST00000554574 TTF2Q9UNY4 1162 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms