RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 USP17L7P0C7H9 530 aa7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 SRSF11Q05519 484 aaKnown RBP7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 ELMSAN1Q6PJG2 1045 aa7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 GOLGA6L1Q8N7Z2 621 aa7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 HHIPQ96QV1 700 aa7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 DZANK1Q9NVP4 752 aa7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 FAM8A1Q9UBU6 413 aa7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 GDF2Q9UK05 429 aaPredicted RBP7.68□□□□□ -1.18
MTHFD1-206ENST00000554353 ELOA3CA0A087WX78 387 aaPredicted RBP7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ELOA3DA6NLF2 546 aaPredicted RBP7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ADARB2-AS1A8MUL3 147 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ADAMTS2O95450 1211 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ALAS2P22557 587 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 GSK3AP49840 483 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 FCGRTP55899 365 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ELOA3BQ3SY89 546 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 PERM1Q5SV97 790 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 CEP135Q66GS9 1140 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ELOA3Q8NG57 546 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ASAP3Q8TDY4 903 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 PLD4Q96BZ4 506 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 PBX4Q9BYU1 374 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 SRCIN1Q9C0H9 1055 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 SMG9Q9H0W8 520 aaKnown RBP7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 NAGPAQ9UK23 515 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 ABCC10Q5T3U5 1492 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 MAPKBP1O60336 1514 aa7.67□□□□□ -1.18
MTHFD1-206ENST00000554353 METTL12A8MUP2 240 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 PDE2AO00408 941 aaPredicted RBP7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 CTSHP09668 335 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 TCF3P15923 654 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 CCNJLQ8IV13 435 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 GLIS3Q8NEA6 775 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 CRELD1Q96HD1 420 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 TCF12Q99081 682 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 CARMIL1Q5VZK9 1371 aa7.66□□□□□ -1.18
MTHFD1-206ENST00000554353 KRTAP9-6A0A140TA67 174 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 TMEM238LA0A1B0GVL6 79 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 NFKBIEO00221 500 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 SMNDC1O75940 238 aaKnown RBP eCLIP7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 GSTT1P30711 240 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 PSAPL1Q6NUJ1 521 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 DTHD1Q6ZMT9 781 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 SLCO4C1Q6ZQN7 724 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 NUDT8Q8WV74 236 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 NXPE3Q969Y0 559 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 ACDQ96AP0 544 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 ABCB6Q9NP58 842 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 DIP2BQ9P265 1576 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 AKAP2Q9Y2D5 859 aa7.65□□□□□ -1.18
MTHFD1-206ENST00000554353 SCAMP3O14828 347 aaKnown RBP7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 EPXP11678 715 aa7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 GRIA4P48058 902 aa7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 SPRED3Q2MJR0 410 aa7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 LDLRAD1Q5T700 205 aa7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 MEI1Q5TIA1 1274 aa7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 PRPF40BQ6NWY9 871 aaKnown RBP7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 TMEM102Q8N9M5 508 aaPredicted RBP7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 POP1Q99575 1024 aaKnown RBP7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 LACRTQ9GZZ8 138 aa7.64□□□□□ -1.19
MTHFD1-206ENST00000554353 PTPRGP23470 1445 aa7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 RGS9O75916 674 aaPredicted RBP7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 CDK11BP21127 795 aaKnown RBP7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 C9orf131Q5VYM1 1079 aa7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 GDF6Q6KF10 455 aaPredicted RBP7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 C1orf229Q6ZS94 237 aaPredicted RBP7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 GALNT6Q8NCL4 622 aa7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 EDARADDQ8WWZ3 215 aa7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 MDFIQ99750 246 aa7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 LPIN3Q9BQK8 851 aa7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 BHLHE41Q9C0J9 482 aaPredicted RBP7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 TTF2Q9UNY4 1162 aaKnown RBP7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 TRIM33Q9UPN9 1127 aa7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 CDK11AQ9UQ88 783 aaPredicted RBP7.63□□□□□ -1.19
MTHFD1-206ENST00000554353 A0A096LPE4 126 aa7.62□□□□□ -1.19
MTHFD1-206ENST00000554353 A0A1W2PPZ6 126 aa7.62□□□□□ -1.19
MTHFD1-206ENST00000554353 TAF1CQ15572 869 aaPredicted RBP7.62□□□□□ -1.19
MTHFD1-206ENST00000554353 JPH1Q9HDC5 661 aaPredicted RBP7.62□□□□□ -1.19
MTHFD1-206ENST00000554353 IGSF5Q9NSI5 407 aa7.62□□□□□ -1.19
MTHFD1-206ENST00000554353 IQGAP2Q13576 1575 aa7.62□□□□□ -1.19
MTHFD1-206ENST00000554353 CARMIL2Q6F5E8 1435 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 KDM6BO15054 1643 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 FAM177BA6PVY3 158 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 XRCC5P13010 732 aaKnown RBP7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 PTPRAP18433 802 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 AMPD1P23109 780 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 ZNF76P36508 570 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 C3orf58Q8NDZ4 430 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 FRRS1LQ9P0K9 344 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 STARD13Q9Y3M8 1113 aa7.61□□□□□ -1.19
MTHFD1-206ENST00000554353 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 TNIKQ9UKE5 1360 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 FBXO24O75426 580 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 ALBP02768 609 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 SLURP2P0DP57 97 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 BCRP11274 1271 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 HDLBPQ00341 1268 aaKnown RBP7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 KRTAP1-3Q8IUG1 177 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 BSNDQ8WZ55 320 aa7.6□□□□□ -1.19
MTHFD1-206ENST00000554353 RNF34Q969K3 372 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms