RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 OVOS2A0A0G2JMS6 1433 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 OVOS2A0A0J9YW53 1432 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 OVOS2Q6IE36 1432 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 PRAG1Q86YV5 1406 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 USP17L5A8MUK1 530 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 LZTS3O60299 673 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-226ENST00000554350 ADAM23O75077 832 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 SAMD5Q5TGI4 173 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 PTF1AQ7RTS3 328 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 KIAA1024Q9UPX6 916 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 KIAA0232Q92628 1395 aa8.58□□□□□ -1.04
ATXN3-226ENST00000554350 RGPD8O14715 1765 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-226ENST00000554350 KHNYNO15037 678 aaKnown RBP8.57□□□□□ -1.04
ATXN3-226ENST00000554350 ZBTB7BO15156 539 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-226ENST00000554350 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-226ENST00000554350 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
ATXN3-226ENST00000554350 FAM50AQ14320 339 aaKnown RBP8.57□□□□□ -1.04
ATXN3-226ENST00000554350 TXNRD1Q16881 649 aa8.57□□□□□ -1.04
ATXN3-226ENST00000554350 LARP1Q6PKG0 1096 aaKnown RBP8.57□□□□□ -1.04
ATXN3-226ENST00000554350 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
ATXN3-226ENST00000554350 AATKQ6ZMQ8 1374 aa8.57□□□□□ -1.04
ATXN3-226ENST00000554350 PLEKHH1Q9ULM0 1364 aa8.57□□□□□ -1.04
ATXN3-226ENST00000554350 NRXN1Q9ULB1 1477 aa8.57□□□□□ -1.04
ATXN3-226ENST00000554350 EML1O00423 815 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 BACH1O14867 736 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 AMPD1P23109 780 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 HTRA3P83110 453 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 TEAD4Q15561 434 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 ALYREFQ86V81 257 aaKnown RBP8.56□□□□□ -1.04
ATXN3-226ENST00000554350 L3MBTL2Q969R5 705 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 MDFIQ99750 246 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-226ENST00000554350 GPRASP1Q5JY77 1395 aa8.56□□□□□ -1.04
ATXN3-226ENST00000554350 SSH2Q76I76 1423 aa8.55□□□□□ -1.04
ATXN3-226ENST00000554350 ADH6P28332 368 aa8.55□□□□□ -1.04
ATXN3-226ENST00000554350 GRIN2CQ14957 1233 aa8.55□□□□□ -1.04
ATXN3-226ENST00000554350 TBCELQ5QJ74 424 aa8.55□□□□□ -1.04
ATXN3-226ENST00000554350 CHSY3Q70JA7 882 aa8.55□□□□□ -1.04
ATXN3-226ENST00000554350 DHX57Q6P158 1386 aaKnown RBP8.54□□□□□ -1.04
ATXN3-226ENST00000554350 GNB5O14775 395 aa8.54□□□□□ -1.04
ATXN3-226ENST00000554350 NOS2P35228 1153 aa8.54□□□□□ -1.04
ATXN3-226ENST00000554350 CLDN10P78369 228 aa8.54□□□□□ -1.04
ATXN3-226ENST00000554350 SAFB2Q14151 953 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-226ENST00000554350 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-226ENST00000554350 SLC9A9Q8IVB4 645 aa8.54□□□□□ -1.04
ATXN3-226ENST00000554350 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
ATXN3-226ENST00000554350 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
ATXN3-226ENST00000554350 CLTCL1P53675 1640 aa8.54□□□□□ -1.04
ATXN3-226ENST00000554350 KIF1BO60333 1816 aa8.53□□□□□ -1.04
ATXN3-226ENST00000554350 PCBP4P57723 403 aaKnown RBP8.53□□□□□ -1.04
ATXN3-226ENST00000554350 JMYQ8N9B5 988 aa8.53□□□□□ -1.04
ATXN3-226ENST00000554350 SBF2Q86WG5 1849 aa8.52□□□□□ -1.04
ATXN3-226ENST00000554350 WDR90Q96KV7 1748 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 ADCY9O60503 1353 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 TOMM70O94826 608 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 LAMC2Q13753 1193 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 DDB1Q16531 1140 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 NUTM2GQ5VZR2 741 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 TMEM132EQ6IEE7 984 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 BICDL1Q6ZP65 573 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 MARK1Q9P0L2 795 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 THRAP3Q9Y2W1 955 aaKnown RBP8.52□□□□□ -1.05
ATXN3-226ENST00000554350 TOPAZ1Q8N9V7 1692 aa8.52□□□□□ -1.05
ATXN3-226ENST00000554350 ALS2Q96Q42 1657 aa8.51□□□□□ -1.05
ATXN3-226ENST00000554350 ZBTB7CA1YPR0 619 aa8.51□□□□□ -1.05
ATXN3-226ENST00000554350 DKK1O94907 266 aa8.51□□□□□ -1.05
ATXN3-226ENST00000554350 HSPA1AP0DMV8 641 aaKnown RBP8.51□□□□□ -1.05
ATXN3-226ENST00000554350 HSPA1BP0DMV9 641 aaKnown RBP8.51□□□□□ -1.05
ATXN3-226ENST00000554350 LRRC69Q6ZNQ3 347 aa8.51□□□□□ -1.05
ATXN3-226ENST00000554350 NGDNQ8NEJ9 315 aaKnown RBP8.51□□□□□ -1.05
ATXN3-226ENST00000554350 TPCN2Q8NHX9 752 aa8.51□□□□□ -1.05
ATXN3-226ENST00000554350 TRPM3Q9HCF6 1732 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-226ENST00000554350 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
ATXN3-226ENST00000554350 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
ATXN3-226ENST00000554350 ACIN1Q9UKV3 1341 aaKnown RBP8.51□□□□□ -1.05
ATXN3-226ENST00000554350 C1QTNF9BB2RNN3 333 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 HDGFL1Q5TGJ6 251 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 CD163Q86VB7 1156 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 C16orf71Q8IYS4 520 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-226ENST00000554350 TRIM11Q96F44 468 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 TSPAN10Q9H1Z9 355 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-226ENST00000554350 PEAK1Q9H792 1746 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 GJA3Q9Y6H8 435 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 ATP7BP35670 1465 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 RPGRIP1LQ68CZ1 1315 aa8.5□□□□□ -1.05
ATXN3-226ENST00000554350 CHRNA4P43681 627 aa8.49□□□□□ -1.05
ATXN3-226ENST00000554350 ZNF827Q17R98 1081 aa8.49□□□□□ -1.05
ATXN3-226ENST00000554350 CCDC102BQ68D86 513 aa8.49□□□□□ -1.05
ATXN3-226ENST00000554350 TRIM50Q86XT4 487 aa8.49□□□□□ -1.05
ATXN3-226ENST00000554350 WWC1Q8IX03 1113 aa8.49□□□□□ -1.05
ATXN3-226ENST00000554350 CRYBG1Q9Y4K1 1723 aa8.49□□□□□ -1.05
ATXN3-226ENST00000554350 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 TNS2Q63HR2 1409 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 VPS8Q8N3P4 1428 aa8.48□□□□□ -1.05
ATXN3-226ENST00000554350 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms