RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
ACTN1-212ENST00000554158 GTF2IP78347 998 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 PTPN12Q05209 780 aaKnown RBP10.41□□□□□ -0.74
ACTN1-212ENST00000554158 SUPT20HL1Q3ZLR7 823 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 INTS3Q68E01 1043 aaKnown RBP10.41□□□□□ -0.74
ACTN1-212ENST00000554158 UBE3BQ7Z3V4 1068 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 ERO1AQ96HE7 468 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 MXD3Q9BW11 206 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 TRIM17Q9Y577 477 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 LAMB1P07942 1786 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 AK9Q5TCS8 1911 aa10.41□□□□□ -0.74
ACTN1-212ENST00000554158 RBBP6Q7Z6E9 1792 aaKnown RBP10.4□□□□□ -0.74
ACTN1-212ENST00000554158 ZNF853P0CG23 659 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 ITGA6P23229 1130 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 IREB2P48200 963 aaKnown RBP10.4□□□□□ -0.74
ACTN1-212ENST00000554158 RBM5P52756 815 aaKnown RBP eCLIP10.4□□□□□ -0.74
ACTN1-212ENST00000554158 ARHGEF6Q15052 776 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 SPRYD7Q5W111 196 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 C8orf58Q8NAV2 365 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 DEFB129Q9H1M3 183 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 CHMP3Q9Y3E7 222 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 PPP2R3BQ9Y5P8 575 aa10.4□□□□□ -0.74
ACTN1-212ENST00000554158 A0A1B0GUL6 1792 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 ANKRD18BA2A2Z9 1011 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 NEURL1BA8MQ27 555 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 WDHD1O75717 1129 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-212ENST00000554158 ZBTB48P10074 688 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-212ENST00000554158 DSG3P32926 999 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 CWF19L2Q2TBE0 894 aaKnown RBP10.39□□□□□ -0.75
ACTN1-212ENST00000554158 TAF7LQ5H9L4 462 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 ZNF804AQ7Z570 1209 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 CFHR5Q9BXR6 569 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 VEZTQ9HBM0 779 aa10.39□□□□□ -0.75
ACTN1-212ENST00000554158 F8W031 263 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-212ENST00000554158 IGKV5-2P06315 115 aa10.38□□□□□ -0.75
ACTN1-212ENST00000554158 FKBP5Q13451 457 aaPredicted RBP10.38□□□□□ -0.75
ACTN1-212ENST00000554158 TNFAIP1Q13829 316 aa10.38□□□□□ -0.75
ACTN1-212ENST00000554158 IFNL1Q8IU54 200 aa10.38□□□□□ -0.75
ACTN1-212ENST00000554158 TMEM106CQ9BVX2 250 aa10.38□□□□□ -0.75
ACTN1-212ENST00000554158 WTIPA6NIX2 430 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-212ENST00000554158 UNCXA6NJT0 531 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 CHRNDQ07001 517 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 IFIT5Q13325 482 aaKnown RBP10.37□□□□□ -0.75
ACTN1-212ENST00000554158 TWISTNBQ3B726 338 aaPredicted RBP10.37□□□□□ -0.75
ACTN1-212ENST00000554158 LDLRAD1Q5T700 205 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 TXNRD3Q86VQ6 643 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 WNK4Q96J92 1243 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 OTOFQ9HC10 1997 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 MYH13Q9UKX3 1938 aa10.37□□□□□ -0.75
ACTN1-212ENST00000554158 CLRN2A0PK11 232 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 H7C1W4 665 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 GCKRQ14397 625 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 CFAP100Q494V2 611 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 NBPF11Q86T75 865 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 ANKRD13AQ8IZ07 590 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 TSR2Q969E8 191 aaKnown RBP10.36□□□□□ -0.75
ACTN1-212ENST00000554158 PLA2G12BQ9BX93 195 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 EFCC1Q9HA90 598 aa10.36□□□□□ -0.75
ACTN1-212ENST00000554158 PLIN1O60240 522 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 TNNI2P48788 182 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 SP3Q02447 781 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 MAP3K11Q16584 847 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 CCDC57Q2TAC2 916 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 TSPYL6Q8N831 410 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 MTMR14Q8NCE2 650 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 CD99L2Q8TCZ2 262 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 DNAAF4Q8WXU2 420 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 PRKRIP1Q9H875 184 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-212ENST00000554158 CNNM1Q9NRU3 951 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 FZD1Q9UP38 647 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 ARAP2Q8WZ64 1704 aa10.35□□□□□ -0.75
ACTN1-212ENST00000554158 TAF5LO75529 589 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 KLRK1P26718 216 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 FKBP1AP62942 108 aaKnown RBP10.34□□□□□ -0.75
ACTN1-212ENST00000554158 FLIIQ13045 1269 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 CRHR2Q13324 411 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 KIF22Q14807 665 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 SLC4A8Q2Y0W8 1093 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-212ENST00000554158 LINS1Q8NG48 757 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 CLMNQ96JQ2 1002 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 R3HDMLQ9H3Y0 253 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 PTPN22Q9Y2R2 807 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 CSADQ9Y600 493 aa10.34□□□□□ -0.75
ACTN1-212ENST00000554158 IGF2BP3O00425 579 aaKnown RBP eCLIP10.33□□□□□ -0.76
ACTN1-212ENST00000554158 FRAT2O75474 233 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-212ENST00000554158 CSF1RP07333 972 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 RASA3Q14644 834 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 SLC9C1Q4G0N8 1177 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 NBPF12Q5TAG4 269 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-212ENST00000554158 LDHAL6AQ6ZMR3 332 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 VPS37DQ86XT2 251 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 ZBED3Q96IU2 234 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-212ENST00000554158 ELP3Q9H9T3 547 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 ZFYVE28Q9HCC9 887 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 CIZ1Q9ULV3 898 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-212ENST00000554158 JAG2Q9Y219 1238 aa10.33□□□□□ -0.76
ACTN1-212ENST00000554158 POTEFA5A3E0 1075 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms