RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 MEIS3Q99687 375 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 OCEL1Q9H607 264 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 GBA2Q9HCG7 927 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 TPRP12270 2363 aaKnown RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 MINDY4BA8MYZ0 360 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ECE1P42892 770 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 RAB3GAP1Q15042 981 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 PI16Q6UXB8 463 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 CCDC191Q8NCU4 936 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 LINS1Q8NG48 757 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 SUCLG2Q96I99 432 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ZIC5Q96T25 663 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 TRPC6Q9Y210 931 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 ATP6V0A2Q9Y487 856 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 TRIM17Q9Y577 477 aa3.08□□□□□ -1.92
PRPF39-205ENST00000554081 COL14A1Q05707 1796 aaKnown RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 MAP1BP46821 2468 aaKnown RBP3.08□□□□□ -1.92
PRPF39-205ENST00000554081 BRWD3Q6RI45 1802 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 KIF1AQ12756 1690 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 NEURL1BA8MQ27 555 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 HTATSF1O43719 755 aaKnown RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 NTSR2O95665 410 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 POLR3DP05423 398 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 SLC5A1P13866 664 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ATP2B3Q16720 1220 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 CFAP100Q494V2 611 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 VPS53Q5VIR6 699 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 TTLL11Q8NHH1 800 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 DPF3Q92784 378 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 BOLA2Q9H3K6 86 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 BCCIPQ9P287 314 aaKnown RBP eCLIP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 MINPP1Q9UNW1 487 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 SUPT16HQ9Y5B9 1047 aaKnown RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ARHGEF28Q8N1W1 1705 aaKnown RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ERVV-1B6SEH8 477 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 SMARCA5O60264 1052 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 VAMP4O75379 141 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 FGD1P98174 961 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 RASA3Q14644 834 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 EPHA10Q5JZY3 1008 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 CCDC158Q5M9N0 1113 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ANO1Q5XXA6 986 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ZKSCAN2Q63HK3 967 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 STYK1Q6J9G0 422 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ARMC9Q7Z3E5 817 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 AACSQ86V21 672 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 LDHDQ86WU2 507 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 DHX37Q8IY37 1157 aaKnown RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 GPC2Q8N158 579 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ZKSCAN4Q969J2 545 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 DDRGK1Q96HY6 314 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 WRNIP1Q96S55 665 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 TMEM39BQ9GZU3 492 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 DEFB129Q9H1M3 183 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 ADARB2Q9NS39 739 aaKnown RBP3.07□□□□□ -1.92
PRPF39-205ENST00000554081 USP40Q9NVE5 1235 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 NHSL1Q5SYE7 1610 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 RGPD5Q99666 1765 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 SHPRHQ149N8 1683 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 XDHP47989 1333 aa3.07□□□□□ -1.92
PRPF39-205ENST00000554081 NPC1L1Q9UHC9 1359 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 RGL2O15211 777 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 IGKV5-2P06315 115 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 LDHBP07195 334 aaKnown RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ATP2B4P23634 1241 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 KIF23Q02241 960 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 TAF1CQ15572 869 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 NBPF12Q5TAG4 269 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ANKRD45Q5TZF3 282 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 EP400NLQ6ZTU2 488 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 MAPKAPK5Q8IW41 473 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 PKNOX2Q96KN3 472 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 PLEKHF1Q96S99 279 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 API5Q9BZZ5 524 aaKnown RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 MYOZ2Q9NPC6 264 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 AATFQ9NY61 560 aaKnown RBP eCLIP3.06□□□□□ -1.922e-7■■■■■ 32.8
PRPF39-205ENST00000554081 GPRC5DQ9NZD1 345 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 HCSTQ9UBK5 93 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 BDP1A6H8Y1 2624 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 MYO7AQ13402 2215 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 FOXN1O15353 648 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 PRELPP51888 382 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 CC2D2BQ6DHV5 1058 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 SP8Q8IXZ3 490 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 DZIP1LQ8IYY4 767 aaKnown RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ZNF34Q8IZ26 560 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ZNF687Q8N1G0 1237 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 TMEM57Q8N5G2 664 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 KLRG1Q96E93 195 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 CLMNQ96JQ2 1002 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 PRMT6Q96LA8 375 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ANKRD2Q9GZV1 360 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 CD209Q9NNX6 404 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 PICK1Q9NRD5 415 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ADGRB2O60241 1585 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 WDR33Q9C0J8 1336 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms