RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-209	ENST00000553889	JAK2	O60674	1132 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	NTSR2	O95665	410 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	SLC5A1	P13866	664 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	TERF1	P54274	439 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	SF3B3	Q15393	1217 aa	Known RBP	10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	CCDC152	Q4G0S7	254 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	SLC10A5	Q5PT55	438 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	RC3H1	Q5TC82	1133 aa	Known RBP	10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	NCOA7	Q8NI08	942 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	SPATA32	Q96LK8	384 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	TCEANC2	Q96MN5	208 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	ARX	Q96QS3	562 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	PUS7L	Q9H0K6	701 aa	Known RBP	10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	RTN4	Q9NQC3	1192 aa	Known RBP	10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	CCDC39	Q9UFE4	941 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	TBC1D2B	Q9UPU7	963 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	ZNF652	Q9Y2D9	606 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	MYH14	Q7Z406	1995 aa	Known RBP	10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	NID2	Q14112	1375 aa		10.86	□□□□□ -0.67
PRKCH-209	ENST00000553889	PTPDC1	A2A3K4	754 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	PDE6A	P16499	860 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	GNAT2	P19087	354 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	RCAN1	P53805	252 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	FGD1	P98174	961 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	APOBR	Q0VD83	1088 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	WASHC4	Q2M389	1173 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	SUSD4	Q5VX71	490 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	ZNF396	Q96N95	335 aa	Predicted RBP	10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	STRBP	Q96SI9	672 aa	Known RBP	10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	CDC5L	Q99459	802 aa	Known RBP	10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	CLSTN2	Q9H4D0	955 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	ZKSCAN5	Q9Y2L8	839 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	BCL9L	Q86UU0	1499 aa		10.85	□□□□□ -0.67
PRKCH-209	ENST00000553889	ZNF804B	A4D1E1	1349 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	PDS5A	Q29RF7	1337 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	PNPLA7	Q6ZV29	1317 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	CNTNAP4	Q9C0A0	1308 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	TIAM2	Q8IVF5	1701 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	ZNF213	O14771	459 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	CTAGE5	O15320	804 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	CCDC192	P0DO97	292 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	ATP6V1A	P38606	617 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	ANTXR2	P58335	489 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	ITPK1	Q13572	414 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	VPS72	Q15906	364 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	SLC9C2	Q5TAH2	1124 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	TTLL5	Q6EMB2	1281 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	SGMS1	Q86VZ5	419 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	TMEM87B	Q96K49	555 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	NUP62CL	Q9H1M0	184 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	PIH1D3	Q9NQM4	214 aa	Known RBP	10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	USP25	Q9UHP3	1055 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	HPS5	Q9UPZ3	1129 aa		10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.84	□□□□□ -0.67
PRKCH-209	ENST00000553889	PATL2	C9JE40	543 aa	Known RBP	10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889		H3BQV1	296 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	PRC1	O43663	620 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	FDPS	P14324	419 aa	Known RBP	10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	LIFR	P42702	1097 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	PHKA1	P46020	1223 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	MAP3K12	Q12852	859 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	STK3	Q13188	491 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	MAP3K11	Q16584	847 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	SLFNL1	Q499Z3	407 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	IFFO2	Q5TF58	517 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	BRAP	Q7Z569	592 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	RALYL	Q86SE5	291 aa	Known RBP	10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	FERMT3	Q86UX7	667 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	SPATA5	Q8NB90	893 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	FAM200A	Q8TCP9	573 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	PGBD1	Q96JS3	809 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	NBPF3	Q9H094	633 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	RTEL1	Q9NZ71	1219 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889	MYH15	Q9Y2K3	1946 aa		10.83	□□□□□ -0.68
PRKCH-209	ENST00000553889		A0A1W2PQ27	194 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889		A0A1W2PQ64	194 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889		A0A1W2PQD8	194 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	GOLGA6L4	A6NEF3	574 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	KDM4A	O75164	1064 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	TPM3	P06753	285 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	LIG1	P18858	919 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	TRDN	Q13061	729 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	UBE4A	Q14139	1066 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	FBXO18	Q8NFZ0	1043 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	CNNM2	Q9H8M5	875 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	ANGEL1	Q9UNK9	670 aa	Known RBP	10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889	ZNF532	Q9HCE3	1301 aa		10.82	□□□□□ -0.68
PRKCH-209	ENST00000553889		A0A0G2JLW4	131 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	SH2B2	O14492	632 aa	Predicted RBP	10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	SEMA3E	O15041	775 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	TOM1	O60784	492 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	OFD1	O75665	1012 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	CDKL5	O76039	1030 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	YEATS4	O95619	227 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	IGHMBP2	P38935	993 aa	Known RBP	10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	NT5C2	P49902	561 aa		10.81	□□□□□ -0.68
PRKCH-209	ENST00000553889	RASGRF1	Q13972	1273 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms