RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 ANTXR1Q9H6X2 564 aa17.15■□□□□ 0.34
PRKCH-206ENST00000553830 CD209Q9NNX6 404 aa17.15■□□□□ 0.34
PRKCH-206ENST00000553830 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
PRKCH-206ENST00000553830 DOCK2Q92608 1830 aa17.14■□□□□ 0.34
PRKCH-206ENST00000553830 TBC1D9Q6ZT07 1266 aa17.14■□□□□ 0.33
PRKCH-206ENST00000553830 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
PRKCH-206ENST00000553830 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
PRKCH-206ENST00000553830 ZNF512BQ96KM6 892 aaPredicted RBP17.14■□□□□ 0.33
PRKCH-206ENST00000553830 PSMD1Q99460 953 aa17.14■□□□□ 0.33
PRKCH-206ENST00000553830 DENND2AQ9ULE3 1009 aa17.14■□□□□ 0.33
PRKCH-206ENST00000553830 NFKBIEO00221 500 aa17.13■□□□□ 0.33
PRKCH-206ENST00000553830 ECE2O60344 883 aa17.13■□□□□ 0.33
PRKCH-206ENST00000553830 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
PRKCH-206ENST00000553830 COA1Q9GZY4 146 aa17.13■□□□□ 0.33
PRKCH-206ENST00000553830 PIH1D3Q9NQM4 214 aaKnown RBP17.13■□□□□ 0.33
PRKCH-206ENST00000553830 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
PRKCH-206ENST00000553830 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
PRKCH-206ENST00000553830 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
PRKCH-206ENST00000553830 KIAA2012Q0VF49 1180 aa17.12■□□□□ 0.33
PRKCH-206ENST00000553830 TDRD7Q8NHU6 1098 aaKnown RBP17.12■□□□□ 0.33
PRKCH-206ENST00000553830 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
PRKCH-206ENST00000553830 COL4A5P29400 1685 aa17.11■□□□□ 0.33
PRKCH-206ENST00000553830 SEMA3EO15041 775 aa17.11■□□□□ 0.33
PRKCH-206ENST00000553830 CDC45O75419 566 aa17.11■□□□□ 0.33
PRKCH-206ENST00000553830 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
PRKCH-206ENST00000553830 GPR162Q16538 588 aa17.11■□□□□ 0.33
PRKCH-206ENST00000553830 SBF1O95248 1867 aa17.11■□□□□ 0.33
PRKCH-206ENST00000553830 IL1R1P14778 569 aa17.1■□□□□ 0.33
PRKCH-206ENST00000553830 GTF2IP78347 998 aa17.1■□□□□ 0.33
PRKCH-206ENST00000553830 NIM1KQ8IY84 436 aa17.1■□□□□ 0.33
PRKCH-206ENST00000553830 DIAPH3Q9NSV4 1193 aa17.1■□□□□ 0.33
PRKCH-206ENST00000553830 MAST2Q6P0Q8 1798 aa17.1■□□□□ 0.33
PRKCH-206ENST00000553830 PSME4Q14997 1843 aa17.1■□□□□ 0.33
PRKCH-206ENST00000553830 CHGBP05060 677 aa17.09■□□□□ 0.33
PRKCH-206ENST00000553830 TTF1Q15361 905 aaPredicted RBP17.09■□□□□ 0.33
PRKCH-206ENST00000553830 SLFNL1Q499Z3 407 aa17.09■□□□□ 0.33
PRKCH-206ENST00000553830 KBTBD3Q8NAB2 608 aa17.09■□□□□ 0.33
PRKCH-206ENST00000553830 MXD3Q9BW11 206 aa17.09■□□□□ 0.33
PRKCH-206ENST00000553830 KCNQ5Q9NR82 932 aa17.09■□□□□ 0.33
PRKCH-206ENST00000553830 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
PRKCH-206ENST00000553830 LRP2BPQ9P2M1 347 aa17.09■□□□□ 0.33
PRKCH-206ENST00000553830 DICER1Q9UPY3 1922 aaKnown RBP17.09■□□□□ 0.33
PRKCH-206ENST00000553830 MYH2Q9UKX2 1941 aa17.08■□□□□ 0.33
PRKCH-206ENST00000553830 ZNF646O15015 1829 aaPredicted RBP17.08■□□□□ 0.33
PRKCH-206ENST00000553830 CASC1Q6TDU7 716 aa17.08■□□□□ 0.32
PRKCH-206ENST00000553830 YDJCA8MPS7 323 aa17.07■□□□□ 0.32
PRKCH-206ENST00000553830 CHMLP26374 656 aa17.07■□□□□ 0.32
PRKCH-206ENST00000553830 NMIQ13287 307 aaPredicted RBP17.07■□□□□ 0.32
PRKCH-206ENST00000553830 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
PRKCH-206ENST00000553830 TTLL5Q6EMB2 1281 aa17.07■□□□□ 0.32
PRKCH-206ENST00000553830 WDR66Q8TBY9 1149 aa17.07■□□□□ 0.32
PRKCH-206ENST00000553830 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.07■□□□□ 0.32
PRKCH-206ENST00000553830 LTBP3Q9NS15 1303 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 F8W031 263 aaPredicted RBP17.06■□□□□ 0.32
PRKCH-206ENST00000553830 RAD17O75943 681 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 PRELPP51888 382 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
PRKCH-206ENST00000553830 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 PODNQ7Z5L7 613 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 JDP2Q8WYK2 163 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
PRKCH-206ENST00000553830 ADAMTSL1Q8N6G6 1762 aa17.05■□□□□ 0.32
PRKCH-206ENST00000553830 PDS5AQ29RF7 1337 aaKnown RBP17.05■□□□□ 0.32
PRKCH-206ENST00000553830 RNF113AO15541 343 aaKnown RBP17.05■□□□□ 0.32
PRKCH-206ENST00000553830 PRDX5P30044 214 aa17.05■□□□□ 0.32
PRKCH-206ENST00000553830 MAP3K12Q12852 859 aa17.05■□□□□ 0.32
PRKCH-206ENST00000553830 GRIK5Q16478 980 aa17.05■□□□□ 0.32
PRKCH-206ENST00000553830 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
PRKCH-206ENST00000553830 FAM227BQ96M60 508 aa17.05■□□□□ 0.32
PRKCH-206ENST00000553830 FAM205AQ6ZU69 1335 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 A0A0D9SFI3 127 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 USP17L3A6NCW0 530 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 USP17L4A6NCW7 530 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
PRKCH-206ENST00000553830 PDE6AP16499 860 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
PRKCH-206ENST00000553830 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
PRKCH-206ENST00000553830 ZSCAN25Q6NSZ9 544 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 USP17L1Q7RTZ2 530 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 DZIP1Q86YF9 867 aaKnown RBP17.04■□□□□ 0.32
PRKCH-206ENST00000553830 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
PRKCH-206ENST00000553830 VPS33BQ9H267 617 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 ZNRF3Q9ULT6 936 aa17.04■□□□□ 0.32
PRKCH-206ENST00000553830 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
PRKCH-206ENST00000553830 ZNF532Q9HCE3 1301 aa17.03■□□□□ 0.32
PRKCH-206ENST00000553830 HIP1O00291 1037 aa17.03■□□□□ 0.32
PRKCH-206ENST00000553830 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
PRKCH-206ENST00000553830 CCDC129Q6ZRS4 1044 aa17.03■□□□□ 0.32
PRKCH-206ENST00000553830 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
PRKCH-206ENST00000553830 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
PRKCH-206ENST00000553830 SALL1Q9NSC2 1324 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 PSMD14O00487 310 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 LMNB1P20700 586 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 CYP7A1P22680 504 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 ADD2P35612 726 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 MECOMQ03112 1051 aa17.02■□□□□ 0.32
PRKCH-206ENST00000553830 NAA16Q6N069 864 aaPredicted RBP17.02■□□□□ 0.32
PRKCH-206ENST00000553830 CERS5Q8N5B7 392 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms