RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 R3HDMLQ9H3Y0 253 aa22.6■■□□□ 1.21
SYNE2-211ENST00000553801 IL16Q14005 1332 aa22.59■■□□□ 1.21
SYNE2-211ENST00000553801 ZNF804AQ7Z570 1209 aa22.59■■□□□ 1.21
SYNE2-211ENST00000553801 IFNL1Q8IU54 200 aa22.59■■□□□ 1.21
SYNE2-211ENST00000553801 CACNA1FO60840 1977 aa22.58■■□□□ 1.21
SYNE2-211ENST00000553801 FKBP1AP62942 108 aaKnown RBP22.58■■□□□ 1.21
SYNE2-211ENST00000553801 IFIT5Q13325 482 aaKnown RBP22.58■■□□□ 1.21
SYNE2-211ENST00000553801 TAF5LO75529 589 aa22.57■■□□□ 1.2
SYNE2-211ENST00000553801 CFAP100Q494V2 611 aa22.57■■□□□ 1.2
SYNE2-211ENST00000553801 CERS5Q8N5B7 392 aa22.57■■□□□ 1.2
SYNE2-211ENST00000553801 WNK4Q96J92 1243 aa22.57■■□□□ 1.2
SYNE2-211ENST00000553801 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
SYNE2-211ENST00000553801 FZD1Q9UP38 647 aa22.57■■□□□ 1.2
SYNE2-211ENST00000553801 IL1R1P14778 569 aa22.56■■□□□ 1.2
SYNE2-211ENST00000553801 OTUD7BQ6GQQ9 843 aa22.56■■□□□ 1.2
SYNE2-211ENST00000553801 HELBQ8NG08 1087 aaPredicted RBP22.56■■□□□ 1.2
SYNE2-211ENST00000553801 CHMP3Q9Y3E7 222 aa22.56■■□□□ 1.2
SYNE2-211ENST00000553801 TRIM17Q9Y577 477 aa22.56■■□□□ 1.2
SYNE2-211ENST00000553801 IRS2Q9Y4H2 1338 aa22.56■■□□□ 1.2
SYNE2-211ENST00000553801 SPDYE2BA6NHP3 402 aa22.55■■□□□ 1.2
SYNE2-211ENST00000553801 F8W031 263 aaPredicted RBP22.55■■□□□ 1.2
SYNE2-211ENST00000553801 SNAP23O00161 211 aa22.55■■□□□ 1.2
SYNE2-211ENST00000553801 SPDYE6P0CI01 402 aa22.55■■□□□ 1.2
SYNE2-211ENST00000553801 IREB2P48200 963 aaKnown RBP22.55■■□□□ 1.2
SYNE2-211ENST00000553801 NCBP3Q53F19 620 aaKnown RBP22.55■■□□□ 1.2
SYNE2-211ENST00000553801 INTS3Q68E01 1043 aaKnown RBP22.55■■□□□ 1.2
SYNE2-211ENST00000553801 CLMNQ96JQ2 1002 aa22.54■■□□□ 1.2
SYNE2-211ENST00000553801 VEZTQ9HBM0 779 aa22.54■■□□□ 1.2
SYNE2-211ENST00000553801 ECM29Q5VYK3 1845 aa22.54■■□□□ 1.2
SYNE2-211ENST00000553801 CLRN2A0PK11 232 aa22.53■■□□□ 1.2
SYNE2-211ENST00000553801 RBM5P52756 815 aaKnown RBP eCLIP22.53■■□□□ 1.2
SYNE2-211ENST00000553801 FOXO4P98177 505 aa22.53■■□□□ 1.2
SYNE2-211ENST00000553801 OTOP1Q7RTM1 612 aa22.53■■□□□ 1.2
SYNE2-211ENST00000553801 GCC1Q96CN9 775 aa22.53■■□□□ 1.2
SYNE2-211ENST00000553801 ERO1AQ96HE7 468 aa22.53■■□□□ 1.2
SYNE2-211ENST00000553801 PRMT6Q96LA8 375 aaPredicted RBP22.53■■□□□ 1.2
SYNE2-211ENST00000553801 IGF2BP3O00425 579 aaKnown RBP eCLIP22.52■■□□□ 1.2
SYNE2-211ENST00000553801 CCDC57Q2TAC2 916 aa22.52■■□□□ 1.2
SYNE2-211ENST00000553801 TAF7LQ5H9L4 462 aa22.52■■□□□ 1.2
SYNE2-211ENST00000553801 PCDHAC2Q9Y5I4 1007 aa22.52■■□□□ 1.2
SYNE2-211ENST00000553801 SSC5DA1L4H1 1573 aa22.51■■□□□ 1.19
SYNE2-211ENST00000553801 TNFAIP1Q13829 316 aa22.51■■□□□ 1.19
SYNE2-211ENST00000553801 NBPF12Q5TAG4 269 aaPredicted RBP22.51■■□□□ 1.19
SYNE2-211ENST00000553801 ANKRD13AQ8IZ07 590 aa22.51■■□□□ 1.19
SYNE2-211ENST00000553801 VAMP4O75379 141 aa22.5■■□□□ 1.19
SYNE2-211ENST00000553801 USP2O75604 605 aaPredicted RBP22.5■■□□□ 1.19
SYNE2-211ENST00000553801 RASA3Q14644 834 aa22.5■■□□□ 1.19
SYNE2-211ENST00000553801 LMBR1LQ6UX01 489 aa22.5■■□□□ 1.19
SYNE2-211ENST00000553801 LDHAL6AQ6ZMR3 332 aa22.5■■□□□ 1.19
SYNE2-211ENST00000553801 CNNM1Q9NRU3 951 aa22.5■■□□□ 1.19
SYNE2-211ENST00000553801 FANCIQ9NVI1 1328 aa22.5■■□□□ 1.19
SYNE2-211ENST00000553801 PLIN1O60240 522 aa22.49■■□□□ 1.19
SYNE2-211ENST00000553801 BEND3Q5T5X7 828 aa22.49■■□□□ 1.19
SYNE2-211ENST00000553801 JAG2Q9Y219 1238 aa22.48■■□□□ 1.19
SYNE2-211ENST00000553801 PTPN22Q9Y2R2 807 aa22.48■■□□□ 1.19
SYNE2-211ENST00000553801 FAM205AQ6ZU69 1335 aa22.48■■□□□ 1.19
SYNE2-211ENST00000553801 TESPA1A2RU30 521 aaPredicted RBP22.47■■□□□ 1.19
SYNE2-211ENST00000553801 F6X3S4 739 aa22.47■■□□□ 1.19
SYNE2-211ENST00000553801 CRHR2Q13324 411 aa22.47■■□□□ 1.19
SYNE2-211ENST00000553801 WDR63Q8IWG1 891 aa22.47■■□□□ 1.19
SYNE2-211ENST00000553801 CD99L2Q8TCZ2 262 aa22.47■■□□□ 1.19
SYNE2-211ENST00000553801 EFCC1Q9HA90 598 aa22.47■■□□□ 1.19
SYNE2-211ENST00000553801 SERPINA10Q9UK55 444 aa22.47■■□□□ 1.19
SYNE2-211ENST00000553801 LAMB1P07942 1786 aa22.47■■□□□ 1.19
SYNE2-211ENST00000553801 KIAA0100Q14667 2235 aaKnown RBP22.46■■□□□ 1.19
SYNE2-211ENST00000553801 A0A1B0GUL6 1792 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 GRM8O00222 908 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 GJA5P36382 358 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 SP3Q02447 781 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 UBE4AQ14139 1066 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 SPDYE2Q495Y8 402 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 CCDC184Q52MB2 194 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 MFSD14BQ5SR56 506 aa22.46■■□□□ 1.19
SYNE2-211ENST00000553801 ZNF594Q96JF6 807 aaPredicted RBP22.46■■□□□ 1.19
SYNE2-211ENST00000553801 ZNF70Q9UC06 446 aaPredicted RBP22.46■■□□□ 1.19
SYNE2-211ENST00000553801 EXOSC9Q06265 439 aaKnown RBP22.45■■□□□ 1.18
SYNE2-211ENST00000553801 ARHGEF6Q15052 776 aa22.45■■□□□ 1.18
SYNE2-211ENST00000553801 TDRD7Q8NHU6 1098 aaKnown RBP22.45■■□□□ 1.18
SYNE2-211ENST00000553801 C9orf78Q9NZ63 289 aaPredicted RBP22.45■■□□□ 1.18
SYNE2-211ENST00000553801 TTF2Q9UNY4 1162 aaKnown RBP22.45■■□□□ 1.18
SYNE2-211ENST00000553801 POTEFA5A3E0 1075 aa22.44■■□□□ 1.18
SYNE2-211ENST00000553801 HIBADHP31937 336 aaKnown RBP22.44■■□□□ 1.18
SYNE2-211ENST00000553801 AOX1Q06278 1338 aa22.44■■□□□ 1.18
SYNE2-211ENST00000553801 EPHA10Q5JZY3 1008 aa22.44■■□□□ 1.18
SYNE2-211ENST00000553801 OPTNQ96CV9 577 aa22.44■■□□□ 1.18
SYNE2-211ENST00000553801 PTPN18Q99952 460 aa22.44■■□□□ 1.18
SYNE2-211ENST00000553801 ELP3Q9H9T3 547 aa22.44■■□□□ 1.18
SYNE2-211ENST00000553801 TNNI2P48788 182 aa22.43■■□□□ 1.18
SYNE2-211ENST00000553801 ARMC5Q96C12 935 aa22.43■■□□□ 1.18
SYNE2-211ENST00000553801 TDRD3Q9H7E2 651 aaKnown RBP22.43■■□□□ 1.18
SYNE2-211ENST00000553801 ALDH1L1O75891 902 aa22.42■■□□□ 1.18
SYNE2-211ENST00000553801 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
SYNE2-211ENST00000553801 GYG1P46976 350 aa22.41■■□□□ 1.18
SYNE2-211ENST00000553801 MAP3K9P80192 1104 aa22.41■■□□□ 1.18
SYNE2-211ENST00000553801 FAM84BQ96KN1 310 aaPredicted RBP22.41■■□□□ 1.18
SYNE2-211ENST00000553801 ZFYVE28Q9HCC9 887 aa22.41■■□□□ 1.18
SYNE2-211ENST00000553801 GTF2A2P52657 109 aa22.4■■□□□ 1.18
SYNE2-211ENST00000553801 MS4A4AQ96JQ5 239 aa22.4■■□□□ 1.18
SYNE2-211ENST00000553801 TMEM106CQ9BVX2 250 aa22.4■■□□□ 1.18
SYNE2-211ENST00000553801 SALL2Q9Y467 1007 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms