RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 SSFA2P28290 1259 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 ZAP70P43403 619 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 CBLL1Q75N03 491 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 POU5F2Q8N7G0 328 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 SLC7A3Q8WY07 619 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 OSBPL1AQ9BXW6 950 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 RNF208Q9H0X6 261 aa6.29□□□□□ -1.4
LINC00648-201ENST00000553747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.29□□□□□ -1.4
LINC00648-201ENST00000553747 ACPPP15309 386 aa6.28□□□□□ -1.4
LINC00648-201ENST00000553747 PTPRAP18433 802 aa6.28□□□□□ -1.4
LINC00648-201ENST00000553747 NCAPG2Q86XI2 1143 aa6.28□□□□□ -1.4
LINC00648-201ENST00000553747 GPR152Q8TDT2 470 aa6.28□□□□□ -1.4
LINC00648-201ENST00000553747 KANSL3Q9P2N6 904 aa6.28□□□□□ -1.4
LINC00648-201ENST00000553747 MTMR7Q9Y216 660 aa6.28□□□□□ -1.4
LINC00648-201ENST00000553747 FNDC3AQ9Y2H6 1198 aaKnown RBP6.28□□□□□ -1.4
LINC00648-201ENST00000553747 H3BRJ5 948 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 TRPA1O75762 1119 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 KIF4AO95239 1232 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 FOSL1P15407 271 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 CEP120Q8N960 986 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 HELQQ8TDG4 1101 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 ADAM19Q9H013 955 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 USTQ9Y2C2 406 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 HIF3AQ9Y2N7 669 aa6.27□□□□□ -1.41
LINC00648-201ENST00000553747 CARNS1A5YM72 827 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 FAM177BA6PVY3 158 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 ZBTB39O15060 712 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 PDE4CQ08493 712 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 NFKBIBQ15653 356 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 ZNF648Q5T619 568 aaPredicted RBP6.26□□□□□ -1.41
LINC00648-201ENST00000553747 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 B4GALNT3Q6L9W6 998 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 GIMAP7Q8NHV1 300 aa6.26□□□□□ -1.41
LINC00648-201ENST00000553747 GTF3C2Q8WUA4 911 aaPredicted RBP6.26□□□□□ -1.41
LINC00648-201ENST00000553747 ITGB5P18084 799 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 ADMP35318 185 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 CABP4P57796 275 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 PIP4K2BP78356 416 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 ZNF124Q15973 351 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 NOM1Q5C9Z4 860 aaKnown RBP6.25□□□□□ -1.41
LINC00648-201ENST00000553747 VSIG10LQ86VR7 867 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 C12orf50Q8NA57 414 aaPredicted RBP6.25□□□□□ -1.41
LINC00648-201ENST00000553747 TTC16Q8NEE8 873 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 FBXL18Q96ME1 805 aa6.25□□□□□ -1.41
LINC00648-201ENST00000553747 ABI2Q9NYB9 513 aaPredicted RBP6.25□□□□□ -1.41
LINC00648-201ENST00000553747 PRNPP04156 253 aa6.24□□□□□ -1.41
LINC00648-201ENST00000553747 RPLP1P05386 114 aaKnown RBP6.24□□□□□ -1.41
LINC00648-201ENST00000553747 PCSK2P16519 638 aa6.24□□□□□ -1.41
LINC00648-201ENST00000553747 ATCAYQ86WG3 371 aa6.24□□□□□ -1.41
LINC00648-201ENST00000553747 FLCNQ8NFG4 579 aa6.24□□□□□ -1.41
LINC00648-201ENST00000553747 FBLIM1Q8WUP2 373 aa6.24□□□□□ -1.41
LINC00648-201ENST00000553747 HHIPQ96QV1 700 aa6.24□□□□□ -1.41
LINC00648-201ENST00000553747 OSGEPQ9NPF4 335 aa6.24□□□□□ -1.41
LINC00648-201ENST00000553747 FAM95CA0A1B0GW59 222 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 CYP26A1O43174 497 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 DRD2P14416 443 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 DNM1Q05193 864 aaKnown RBP6.23□□□□□ -1.41
LINC00648-201ENST00000553747 AAMPQ13685 434 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 ALKBH2Q6NS38 261 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 NUDT16Q96DE0 195 aaKnown RBP6.23□□□□□ -1.41
LINC00648-201ENST00000553747 TMEM63CQ9P1W3 806 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 CNTN3Q9P232 1028 aa6.23□□□□□ -1.41
LINC00648-201ENST00000553747 FAM170BA6NMN3 283 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 ABL1P00519 1130 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 JUNBP17275 347 aaPredicted RBP6.22□□□□□ -1.41
LINC00648-201ENST00000553747 MPSTP25325 297 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 EIF1AXP47813 144 aaKnown RBP6.22□□□□□ -1.41
LINC00648-201ENST00000553747 MTMR3Q13615 1198 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 NUTM2GQ5VZR2 741 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 PHLDB3Q6NSJ2 640 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 EDEM1Q92611 657 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 USP26Q9BXU7 913 aa6.22□□□□□ -1.41
LINC00648-201ENST00000553747 MEGF11A6BM72 1044 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 NFKBIEO00221 500 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 FAM13AO94988 1023 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 DLGAP3O95886 979 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 C19orf57Q0VDD7 668 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 SF3B2Q13435 895 aaKnown RBP6.21□□□□□ -1.42
LINC00648-201ENST00000553747 C8orf34Q49A92 452 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 PDE12Q6L8Q7 609 aaKnown RBP6.21□□□□□ -1.42
LINC00648-201ENST00000553747 PAOXQ6QHF9 649 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 ZNF438Q7Z4V0 828 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 WNT8BQ93098 351 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 TBC1D32Q96NH3 1257 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 ELP3Q9H9T3 547 aa6.21□□□□□ -1.42
LINC00648-201ENST00000553747 PAK6Q9NQU5 681 aaPredicted RBP6.21□□□□□ -1.42
LINC00648-201ENST00000553747 BSDC1Q9NW68 430 aaPredicted RBP6.21□□□□□ -1.42
LINC00648-201ENST00000553747 PAPLNO95428 1278 aa6.2□□□□□ -1.42
LINC00648-201ENST00000553747 MZF1P28698 734 aaPredicted RBP6.2□□□□□ -1.42
LINC00648-201ENST00000553747 USP11P51784 963 aa6.2□□□□□ -1.42
LINC00648-201ENST00000553747 FKBP4Q02790 459 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC00648-201ENST00000553747 TMPRSS13Q9BYE2 586 aa6.2□□□□□ -1.42
LINC00648-201ENST00000553747 LRRC4CQ9HCJ2 640 aa6.2□□□□□ -1.42
LINC00648-201ENST00000553747 PDE2AO00408 941 aaPredicted RBP6.19□□□□□ -1.42
LINC00648-201ENST00000553747 SOX1O00570 391 aaPredicted RBP6.19□□□□□ -1.42
LINC00648-201ENST00000553747 TIAF1O95411 115 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 PDGFAP04085 211 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 ARL4DP49703 201 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms