RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 AKR1B10O60218 316 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 HLA-DOAP06340 250 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 RNMTO43148 476 aaKnown RBP17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 TSPY3P0CV98 308 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 TSPY8P0CW00 308 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 GTF2F1P35269 517 aaKnown RBP eCLIP17.51■□□□□ 0.394e-7■■■■□ 25.8
ARHGEF40-202ENST00000553709 PPP4R3AQ6IN85 833 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 GOPCQ9HD26 462 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 TRIM75PA6NK02 468 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 LMOD1P29536 600 aaPredicted RBP17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 GNAQP50148 359 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
ARHGEF40-202ENST00000553709 TOM1O60784 492 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 TUBB4AP04350 444 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 STXBP4Q6ZWJ1 553 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 BRAPQ7Z569 592 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 DCAF5Q96JK2 942 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 GSTTP1A0A1W2PQM5 241 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 GNAT2P19087 354 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 MAP2K1Q02750 393 aaPredicted RBP17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 ORAI2Q96SN7 254 aa17.5■□□□□ 0.39
ARHGEF40-202ENST00000553709 CYLC1P35663 651 aaPredicted RBP17.49■□□□□ 0.39
ARHGEF40-202ENST00000553709 NOP2P46087 812 aaKnown RBP17.49■□□□□ 0.39
ARHGEF40-202ENST00000553709 KRT222Q8N1A0 295 aa17.49■□□□□ 0.39
ARHGEF40-202ENST00000553709 CHL1O00533 1208 aa17.49■□□□□ 0.39
ARHGEF40-202ENST00000553709 CPA1P15085 419 aa17.49■□□□□ 0.39
ARHGEF40-202ENST00000553709 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
ARHGEF40-202ENST00000553709 SPECC1Q5M775 1068 aa17.49■□□□□ 0.39
ARHGEF40-202ENST00000553709 DHX58Q96C10 678 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 BCCIPQ9P287 314 aaKnown RBP eCLIP17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 AOX1Q06278 1338 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 PSMA7O14818 248 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 MYO1BO43795 1136 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 PTGS1P23219 599 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 RFC4P35249 363 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 CABP5Q9NP86 173 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 LAMC1P11047 1609 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 CALM1P0DP23 149 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 CALM2P0DP24 149 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 CALM3P0DP25 149 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 CKAP4Q07065 602 aaKnown RBP17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 ATL3Q6DD88 541 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 HEATR3Q7Z4Q2 680 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 RTL9Q8NET4 1388 aa17.48■□□□□ 0.39
ARHGEF40-202ENST00000553709 CTAGE15A4D2H0 777 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 GCOM1H8Y6P7 765 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 MYZAPP0CAP1 466 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 CTAGE8P0CG41 777 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 ATP6V1AP38606 617 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 CTAGE6Q86UF2 777 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 CTAGE4Q8IX94 777 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 MAGEB6P1A0A0J9YX57 407 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 CTNNBL1Q8WYA6 563 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 UTP14AQ9BVJ6 771 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 TAOK3Q9H2K8 898 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 HELLSQ9NRZ9 838 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 SLU7O95391 586 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 LIG1P18858 919 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 SRRTQ9BXP5 876 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 IL2RBP14784 551 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 DHX37Q8IY37 1157 aaKnown RBP17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 ARFGAP3Q9NP61 516 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 NIP7Q9Y221 180 aaKnown RBP eCLIP17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
ARHGEF40-202ENST00000553709 TBCAO75347 108 aaKnown RBP17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 LMAN1P49257 510 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 MICALCLQ6ZW33 695 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 FAM107BQ9H098 131 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 RPS6KB1P23443 525 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 AGLP35573 1532 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 MACROD2A1Z1Q3 448 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 HOXB7P09629 217 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 CCDC175P0C221 793 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 PRPF4BQ13523 1007 aaKnown RBP17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 ERMNQ8TAM6 284 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
ARHGEF40-202ENST00000553709 IRS4O14654 1257 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 IFI16Q16666 785 aaKnown RBP17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 SYCP3Q8IZU3 236 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 NPHP4O75161 1426 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 CABLES1Q8TDN4 633 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 CALML3P27482 149 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 RBSNQ9H1K0 784 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 SNX14Q9Y5W7 946 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 ASIC1P78348 528 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 MAGEB6Q8N7X4 407 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 FEZ1Q99689 392 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 IFNKQ9P0W0 207 aa17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 ZC3H13Q5T200 1668 aaKnown RBP17.45■□□□□ 0.38
ARHGEF40-202ENST00000553709 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
ARHGEF40-202ENST00000553709 SPAG5Q96R06 1193 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms