RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 UBR1Q8IWV7 1749 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 LRP5O75197 1615 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-223ENST00000553686 ELOA3DA6NLF2 546 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-223ENST00000553686 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 SSFA2P28290 1259 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 GRNP28799 593 aaKnown RBP9.25□□□□□ -0.93
ATXN3-223ENST00000553686 RASSF7Q02833 373 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 ELOA3BQ3SY89 546 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 CHSY3Q70JA7 882 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 ETFBKMTQ8IXQ9 262 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 ELOA3Q8NG57 546 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 PNMA5Q96PV4 448 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 IGFLR1Q9H665 355 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 USP20Q9Y2K6 914 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 RTCBQ9Y3I0 505 aaKnown RBP9.25□□□□□ -0.93
ATXN3-223ENST00000553686 FYCO1Q9BQS8 1478 aa9.25□□□□□ -0.93
ATXN3-223ENST00000553686 KANK1Q14678 1352 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 TNFRSF10BO14763 440 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 SCNN1AP37088 669 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 GSK3AP49840 483 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
ATXN3-223ENST00000553686 RGL4Q8IZJ4 473 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 CMTR1Q8N1G2 835 aaKnown RBP9.24□□□□□ -0.93
ATXN3-223ENST00000553686 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
ATXN3-223ENST00000553686 TNFRSF25Q93038 417 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-223ENST00000553686 DIP2AQ14689 1571 aa9.24□□□□□ -0.93
ATXN3-223ENST00000553686 DCCP43146 1447 aa9.23□□□□□ -0.93
ATXN3-223ENST00000553686 HOXB4P17483 251 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-223ENST00000553686 FAM26DQ5JW98 314 aa9.23□□□□□ -0.93
ATXN3-223ENST00000553686 STIM2Q9P246 746 aa9.23□□□□□ -0.93
ATXN3-223ENST00000553686 MKL2Q9ULH7 1088 aa9.23□□□□□ -0.93
ATXN3-223ENST00000553686 MROH1Q8NDA8 1641 aa9.23□□□□□ -0.93
ATXN3-223ENST00000553686 GDF11O95390 407 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 NFKB1P19838 968 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 TARSP26639 723 aaKnown RBP9.22□□□□□ -0.93
ATXN3-223ENST00000553686 C1QTNF8P60827 252 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 TBC1D8BQ0IIM8 1120 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 KANK3Q6NY19 840 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 LINC00114Q6XXX2 140 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 TMEM151AQ8N4L1 468 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 MDFIQ99750 246 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 C11orf16Q9NQ32 467 aa9.22□□□□□ -0.93
ATXN3-223ENST00000553686 KDM5AP29375 1690 aaKnown RBP9.22□□□□□ -0.93
ATXN3-223ENST00000553686 SASH3O75995 380 aa9.21□□□□□ -0.94
ATXN3-223ENST00000553686 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
ATXN3-223ENST00000553686 KRT25Q7Z3Z0 450 aa9.21□□□□□ -0.94
ATXN3-223ENST00000553686 UNC5CLQ8IV45 518 aa9.21□□□□□ -0.94
ATXN3-223ENST00000553686 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.94
ATXN3-223ENST00000553686 NHSL1Q5SYE7 1610 aa9.2□□□□□ -0.94
ATXN3-223ENST00000553686 ZBTB39O15060 712 aa9.2□□□□□ -0.94
ATXN3-223ENST00000553686 ADH7P40394 386 aa9.2□□□□□ -0.94
ATXN3-223ENST00000553686 UBE2OQ9C0C9 1292 aaKnown RBP9.2□□□□□ -0.94
ATXN3-223ENST00000553686 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-223ENST00000553686 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
ATXN3-223ENST00000553686 EP400Q96L91 3159 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 XYLBO75191 536 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 PHLDB3Q6NSJ2 640 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-223ENST00000553686 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 ZFATQ9P243 1243 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 USTQ9Y2C2 406 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 MST1RQ04912 1400 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 BCL9LQ86UU0 1499 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 MAST1Q9Y2H9 1570 aa9.19□□□□□ -0.94
ATXN3-223ENST00000553686 MAP3K6O95382 1288 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 ZAP70P43403 619 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 DGKGP49619 791 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 ABTB2Q8N961 1025 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 FAM13BQ9NYF5 915 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 RIMS2Q9UQ26 1411 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 STARD13Q9Y3M8 1113 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 KCNMB2Q9Y691 235 aa9.18□□□□□ -0.94
ATXN3-223ENST00000553686 PIK3R2O00459 728 aa9.17□□□□□ -0.94
ATXN3-223ENST00000553686 GNB5O14775 395 aa9.17□□□□□ -0.94
ATXN3-223ENST00000553686 EGFRP00533 1210 aa9.17□□□□□ -0.94
ATXN3-223ENST00000553686 RARAP10276 462 aa9.17□□□□□ -0.94
ATXN3-223ENST00000553686 DNAJB12Q9NXW2 375 aaKnown RBP9.17□□□□□ -0.94
ATXN3-223ENST00000553686 ZFYVE9O95405 1425 aa9.16□□□□□ -0.94
ATXN3-223ENST00000553686 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
ATXN3-223ENST00000553686 GPR152Q8TDT2 470 aa9.16□□□□□ -0.94
ATXN3-223ENST00000553686 SUV39H2Q9H5I1 410 aa9.16□□□□□ -0.94
ATXN3-223ENST00000553686 RRP7BPQ9NSQ0 103 aa9.16□□□□□ -0.94
ATXN3-223ENST00000553686 MTMR7Q9Y216 660 aa9.16□□□□□ -0.94
ATXN3-223ENST00000553686 PIK3C2BO00750 1634 aa9.16□□□□□ -0.94
ATXN3-223ENST00000553686 NOS1P29475 1434 aa9.15□□□□□ -0.94
ATXN3-223ENST00000553686 LRRIQ1Q96JM4 1722 aa9.15□□□□□ -0.94
ATXN3-223ENST00000553686 M0R082 166 aa9.15□□□□□ -0.94
ATXN3-223ENST00000553686 DHX32Q7L7V1 743 aaKnown RBP9.15□□□□□ -0.94
ATXN3-223ENST00000553686 MICALL1Q8N3F8 863 aa9.15□□□□□ -0.94
ATXN3-223ENST00000553686 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
ATXN3-223ENST00000553686 ZNF417Q8TAU3 575 aa9.15□□□□□ -0.94
ATXN3-223ENST00000553686 ZNF587Q96SQ5 575 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-223ENST00000553686 SPON1Q9HCB6 807 aa9.15□□□□□ -0.94
ATXN3-223ENST00000553686 SLC6A14Q9UN76 642 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms