RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 KLHDC7BQ96G42 594 aa8.74□□□□□ -1.01
RAB3IP-217ENST00000552610 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
RAB3IP-217ENST00000552610 EHD4Q9H223 541 aa8.74□□□□□ -1.01
RAB3IP-217ENST00000552610 SEC31BQ9NQW1 1179 aa8.74□□□□□ -1.01
RAB3IP-217ENST00000552610 TPSG1Q9NRR2 321 aa8.74□□□□□ -1.01
RAB3IP-217ENST00000552610 A0A096LPE4 126 aa8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 A0A1W2PPZ6 126 aa8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 SOX1O00570 391 aaPredicted RBP8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 ALX3O95076 343 aa8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 PIP4K2BP78356 416 aa8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 ENOX2Q16206 610 aaKnown RBP8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 WFDC12Q8WWY7 111 aa8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 SLC7A3Q8WY07 619 aa8.73□□□□□ -1.01
RAB3IP-217ENST00000552610 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 ESRRAP11474 423 aaPredicted RBP8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 PLCB3Q01970 1234 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 ZSCAN29Q8IWY8 852 aaPredicted RBP8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 AGGF1Q8N302 714 aaeCLIP8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 GLIS3Q8NEA6 775 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 UBASH3BQ8TF42 649 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 WNT8BQ93098 351 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 SETDB2Q96T68 719 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 ABCB6Q9NP58 842 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 OSGEPQ9NPF4 335 aa8.72□□□□□ -1.01
RAB3IP-217ENST00000552610 GADD45BO75293 160 aaPredicted RBP8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 FURINP09958 794 aa8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 IKBKEQ14164 716 aa8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 GRM2Q14416 872 aa8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 SUZ12Q15022 739 aaKnown RBP8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 PRPF40BQ6NWY9 871 aaKnown RBP8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 MEGF10Q96KG7 1140 aa8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.02
RAB3IP-217ENST00000552610 MAPK8P45983 427 aa8.7□□□□□ -1.02
RAB3IP-217ENST00000552610 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
RAB3IP-217ENST00000552610 P4HBP07237 508 aaKnown RBP8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 NLRP12P59046 1061 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 PCDH1Q08174 1060 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 C19orf57Q0VDD7 668 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 RSPO4Q2I0M5 234 aaPredicted RBP8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 Q6ZS46 218 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 ACAD11Q709F0 780 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 ZNF576Q9H609 170 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 WWC3Q9ULE0 1092 aa8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 CCDC9Q9Y3X0 531 aaKnown RBP8.69□□□□□ -1.02
RAB3IP-217ENST00000552610 ITPKAP23677 461 aa8.68□□□□□ -1.02
RAB3IP-217ENST00000552610 ZNF423Q2M1K9 1284 aa8.68□□□□□ -1.02
RAB3IP-217ENST00000552610 NKAPLQ5M9Q1 402 aa8.68□□□□□ -1.02
RAB3IP-217ENST00000552610 ARL4DP49703 201 aa8.67□□□□□ -1.02
RAB3IP-217ENST00000552610 DUOXA2Q1HG44 320 aa8.67□□□□□ -1.02
RAB3IP-217ENST00000552610 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.67□□□□□ -1.02
RAB3IP-217ENST00000552610 SOX17Q9H6I2 414 aaPredicted RBP8.67□□□□□ -1.02
RAB3IP-217ENST00000552610 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
RAB3IP-217ENST00000552610 ADAM23O75077 832 aa8.66□□□□□ -1.02
RAB3IP-217ENST00000552610 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
RAB3IP-217ENST00000552610 TP53INP1Q96A56 240 aa8.66□□□□□ -1.02
RAB3IP-217ENST00000552610 BCO2Q9BYV7 579 aa8.66□□□□□ -1.02
RAB3IP-217ENST00000552610 NRSN2Q9GZP1 204 aa8.66□□□□□ -1.02
RAB3IP-217ENST00000552610 NLRP2Q9NX02 1062 aa8.66□□□□□ -1.02
RAB3IP-217ENST00000552610 ITGB7P26010 798 aa8.65□□□□□ -1.02
RAB3IP-217ENST00000552610 GSTM4Q03013 218 aa8.65□□□□□ -1.02
RAB3IP-217ENST00000552610 DNAJC14Q6Y2X3 702 aaPredicted RBP8.65□□□□□ -1.02
RAB3IP-217ENST00000552610 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
RAB3IP-217ENST00000552610 TRAK1Q9UPV9 953 aa8.65□□□□□ -1.02
RAB3IP-217ENST00000552610 ANKRD33BA6NCL7 494 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 K7ELQ4 463 aaPredicted RBP8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 B3GALT4O96024 378 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 GLB1P16278 677 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 FCGRTP55899 365 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 FAAP100Q0VG06 881 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 NXPE4Q6UWF7 544 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 FBF1Q8TES7 1133 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 USP26Q9BXU7 913 aa8.64□□□□□ -1.03
RAB3IP-217ENST00000552610 LOC100289279A0A1B0GTE1 492 aa8.63□□□□□ -1.03
RAB3IP-217ENST00000552610 DYRK3O43781 588 aa8.63□□□□□ -1.03
RAB3IP-217ENST00000552610 DLGAP3O95886 979 aa8.63□□□□□ -1.03
RAB3IP-217ENST00000552610 UBL7Q96S82 380 aaPredicted RBP8.63□□□□□ -1.03
RAB3IP-217ENST00000552610 TRIM56Q9BRZ2 755 aaKnown RBP8.63□□□□□ -1.03
RAB3IP-217ENST00000552610 CTSBP07858 339 aa8.62□□□□□ -1.03
RAB3IP-217ENST00000552610 ALG1LQ6GMV1 187 aa8.62□□□□□ -1.03
RAB3IP-217ENST00000552610 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
RAB3IP-217ENST00000552610 RUSC1Q9BVN2 902 aa8.62□□□□□ -1.03
RAB3IP-217ENST00000552610 OSBPL7Q9BZF2 842 aa8.62□□□□□ -1.03
RAB3IP-217ENST00000552610 LDHBP07195 334 aaKnown RBP8.61□□□□□ -1.03
RAB3IP-217ENST00000552610 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
RAB3IP-217ENST00000552610 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
RAB3IP-217ENST00000552610 RNF208Q9H0X6 261 aa8.61□□□□□ -1.03
RAB3IP-217ENST00000552610 SEMA6BQ9H3T3 888 aa8.61□□□□□ -1.03
RAB3IP-217ENST00000552610 ECEL1O95672 775 aa8.6□□□□□ -1.03
RAB3IP-217ENST00000552610 RPS26P11Q5JNZ5 115 aaPredicted RBP8.6□□□□□ -1.03
RAB3IP-217ENST00000552610 C3orf58Q8NDZ4 430 aa8.6□□□□□ -1.03
RAB3IP-217ENST00000552610 H2AFB1P0C5Y9 115 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms