RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	HMOX1	P09601	288 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	LOR	P23490	312 aa	Predicted RBP	8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	BAG6	P46379	1132 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	PTF1A	Q7RTS3	328 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	DEFB132	Q7Z7B7	95 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	POM121	Q96HA1	1249 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	CNTNAP3B	Q96NU0	1288 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	ESYT1	Q9BSJ8	1104 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	COL25A1	Q9BXS0	654 aa	Predicted RBP	8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	CNTNAP3	Q9BZ76	1288 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	MRC1	P22897	1456 aa		8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	COL5A3	P25940	1745 aa	Predicted RBP	8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	KDM6A	O15550	1401 aa	Predicted RBP	8.88	□□□□□ -0.99
CNOT2-238	ENST00000552422	CIC	Q96RK0	1608 aa	Predicted RBP	8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	U2SURP	O15042	1029 aa	Known RBP	8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	IL2RA	P01589	272 aa		8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	PHKG2	P15735	406 aa		8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	AMOT	Q4VCS5	1084 aa		8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	ACSBG1	Q96GR2	724 aa		8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	GRIP2	Q9C0E4	1043 aa		8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	NUDC	Q9Y266	331 aa		8.87	□□□□□ -0.99
CNOT2-238	ENST00000552422	UBR3	Q6ZT12	1888 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	APBA3	O96018	575 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	KRT76	Q01546	638 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	CENPC	Q03188	943 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	TMEM132A	Q24JP5	1023 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	MAP7D1	Q3KQU3	841 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	PLEKHO1	Q53GL0	409 aa	Predicted RBP	8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	RIPOR1	Q6ZS17	1223 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	IFNL2	Q8IZJ0	200 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	PLPP7	Q8NBV4	271 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	CAMKK2	Q96RR4	588 aa		8.86	□□□□□ -0.99
CNOT2-238	ENST00000552422	PLSCR1	O15162	318 aa		8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	GTF2E1	P29083	439 aa	Predicted RBP	8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	NBPF10	Q6P3W6	841 aa	Known RBP	8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	ZNF530	Q6P9A1	599 aa	Predicted RBP	8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	TAS1R3	Q7RTX0	852 aa		8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	NBPF15	Q8N660	670 aa		8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	GAS2L1	Q99501	681 aa	Predicted RBP	8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	CUEDC1	Q9NWM3	386 aa	Predicted RBP	8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	DYRK1B	Q9Y463	629 aa		8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	CASZ1	Q86V15	1759 aa		8.85	□□□□□ -0.99
CNOT2-238	ENST00000552422	MYH14	Q7Z406	1995 aa	Known RBP	8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	SPATA31C2	B4DYI2	1134 aa		8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	HSP90AB1	P08238	724 aa	Known RBP	8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	U2AF1L5	P0DN76	240 aa	Predicted RBP	8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	PRKAR2B	P31323	418 aa		8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	U2AF1	Q01081	240 aa	Known RBP eCLIP	8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	TJP1	Q07157	1748 aa		8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	EZH2	Q15910	746 aa	Known RBP	8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	RNFT1	Q5M7Z0	435 aa		8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	SYTL4	Q96C24	671 aa	Predicted RBP	8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	XAGE2	Q96GT9	111 aa		8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	DCAF5	Q96JK2	942 aa		8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	8.84	□□□□□ -0.99
CNOT2-238	ENST00000552422	KDM3B	Q7LBC6	1761 aa		8.84	□□□□□ -1
CNOT2-238	ENST00000552422	C4B	P0C0L5	1744 aa		8.83	□□□□□ -1
CNOT2-238	ENST00000552422	MTHFSD	Q2M296	383 aa	Known RBP	8.83	□□□□□ -1
CNOT2-238	ENST00000552422	AKAP4	Q5JQC9	854 aa		8.83	□□□□□ -1
CNOT2-238	ENST00000552422	C1orf141	Q5JVX7	400 aa		8.83	□□□□□ -1
CNOT2-238	ENST00000552422	TRIM22	Q8IYM9	498 aa		8.83	□□□□□ -1
CNOT2-238	ENST00000552422	TIMMDC1	Q9NPL8	285 aa		8.83	□□□□□ -1
CNOT2-238	ENST00000552422	MAP3K5	Q99683	1374 aa		8.83	□□□□□ -1
CNOT2-238	ENST00000552422	ERVV-2	B6SEH9	535 aa		8.82	□□□□□ -1
CNOT2-238	ENST00000552422	PIK3CD	O00329	1044 aa		8.82	□□□□□ -1
CNOT2-238	ENST00000552422	STAU1	O95793	577 aa	Known RBP	8.82	□□□□□ -1
CNOT2-238	ENST00000552422	WDR44	Q5JSH3	913 aa		8.82	□□□□□ -1
CNOT2-238	ENST00000552422	GNAS	Q5JWF2	1037 aa		8.82	□□□□□ -1
CNOT2-238	ENST00000552422	TMEM214	Q6NUQ4	689 aa	Known RBP	8.82	□□□□□ -1
CNOT2-238	ENST00000552422	MPRIP	Q6WCQ1	1025 aa		8.82	□□□□□ -1
CNOT2-238	ENST00000552422	ZNF837	Q96EG3	531 aa	Predicted RBP	8.82	□□□□□ -1
CNOT2-238	ENST00000552422	PHACTR3	Q96KR7	559 aa		8.82	□□□□□ -1
CNOT2-238	ENST00000552422	HRH3	Q9Y5N1	445 aa		8.82	□□□□□ -1
CNOT2-238	ENST00000552422	GOLGB1	Q14789	3259 aa	Known RBP	8.82	□□□□□ -1
CNOT2-238	ENST00000552422	C4A	P0C0L4	1744 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	COL24A1	Q17RW2	1714 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422		H7C1W4	665 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	ANP32C	O43423	234 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	PHKA2	P46019	1235 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	TLR1	Q15399	786 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	TXNRD1	Q16881	649 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	GAS2L2	Q8NHY3	880 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	PIGB	Q92521	554 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	GMCL1	Q96IK5	515 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	PLEKHF1	Q96S99	279 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	ALG2	Q9H553	416 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	ETNK1	Q9HBU6	452 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	TMOD3	Q9NYL9	352 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	CEMIP	Q8WUJ3	1361 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	PALLD	Q8WX93	1383 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	LAMB4	A4D0S4	1761 aa		8.81	□□□□□ -1
CNOT2-238	ENST00000552422	LRP5	O75197	1615 aa		8.8	□□□□□ -1
CNOT2-238	ENST00000552422	GNAT3	A8MTJ3	354 aa		8.8	□□□□□ -1
CNOT2-238	ENST00000552422	SKI	P12755	728 aa		8.8	□□□□□ -1
CNOT2-238	ENST00000552422	DBN1	Q16643	649 aa		8.8	□□□□□ -1
CNOT2-238	ENST00000552422	FOXR1	Q6PIV2	292 aa		8.8	□□□□□ -1
CNOT2-238	ENST00000552422	FHDC1	Q9C0D6	1143 aa	Predicted RBP	8.8	□□□□□ -1
CNOT2-238	ENST00000552422	KCP	Q6ZWJ8	1503 aa		8.8	□□□□□ -1
CNOT2-238	ENST00000552422	RNMT	O43148	476 aa	Known RBP	8.79	□□□□□ -1
CNOT2-238	ENST00000552422	F11	P03951	625 aa		8.79	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms