RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ZNF804BA4D1E1 1349 aa7.38□□□□□ -1.23
CCDC65-204ENST00000552188 TAF5LO75529 589 aa7.38□□□□□ -1.23
CCDC65-204ENST00000552188 BCAR3O75815 825 aa7.38□□□□□ -1.23
CCDC65-204ENST00000552188 GNAI3P08754 354 aa7.38□□□□□ -1.23
CCDC65-204ENST00000552188 GMPSP49915 693 aaPredicted RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 BRPF1P55201 1214 aaPredicted RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 EPHA10Q5JZY3 1008 aa7.38□□□□□ -1.23
CCDC65-204ENST00000552188 ZKSCAN2Q63HK3 967 aa7.38□□□□□ -1.23
CCDC65-204ENST00000552188 USP50Q70EL3 339 aaPredicted RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 PODNQ7Z5L7 613 aa7.38□□□□□ -1.23
CCDC65-204ENST00000552188 FTSJ3Q8IY81 847 aaKnown RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 HELBQ8NG08 1087 aaPredicted RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 DDX27Q96GQ7 796 aaKnown RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 GPHNQ9NQX3 736 aaPredicted RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 ADARB2Q9NS39 739 aaKnown RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 CNOT7Q9UIV1 285 aaKnown RBP7.38□□□□□ -1.23
CCDC65-204ENST00000552188 UTYO14607 1347 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 YDJCA8MPS7 323 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 PSMD14O00487 310 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 RPS12P25398 132 aaKnown RBP7.37□□□□□ -1.23
CCDC65-204ENST00000552188 EPS15P42566 896 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 DSG2Q14126 1118 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 METTL24Q5JXM2 366 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 RBM26Q5T8P6 1007 aaKnown RBP7.37□□□□□ -1.23
CCDC65-204ENST00000552188 ATF7IPQ6VMQ6 1270 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 ZNF804AQ7Z570 1209 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 CLUAP1Q96AJ1 413 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 COA1Q9GZY4 146 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 USP44Q9H0E7 712 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 GPRC5DQ9NZD1 345 aa7.37□□□□□ -1.23
CCDC65-204ENST00000552188 ADAMTSL1Q8N6G6 1762 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 FRAT2O75474 233 aaPredicted RBP7.36□□□□□ -1.23
CCDC65-204ENST00000552188 MS4A1P11836 297 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 SCNN1DP51172 638 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 PPP1R15BQ5SWA1 713 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 MAP1SQ66K74 1059 aaPredicted RBP7.36□□□□□ -1.23
CCDC65-204ENST00000552188 USP17L1Q7RTZ2 530 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 VPS37DQ86XT2 251 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 CNTROBQ8N137 903 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 OGFOD1Q8N543 542 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 DPF2Q92785 391 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 KCNQ5Q9NR82 932 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 ECM29Q5VYK3 1845 aa7.36□□□□□ -1.23
CCDC65-204ENST00000552188 MROH5Q6ZUA9 1318 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 VIL1P09327 827 aaKnown RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 TRIM27P14373 513 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 MFSD10Q14728 455 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 RABL6Q3YEC7 729 aaPredicted RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 TBC1D10BQ4KMP7 808 aaPredicted RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 CAVIN4Q5BKX8 364 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 INTS3Q68E01 1043 aaKnown RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 TTLL5Q6EMB2 1281 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 RSBN1LQ6PCB5 846 aaPredicted RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 AGBL3Q8NEM8 1001 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 DCPSQ96C86 337 aaKnown RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 KAZALD1Q96I82 304 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 SCUBE2Q9NQ36 999 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 HDAC9Q9UKV0 1011 aa7.35□□□□□ -1.23
CCDC65-204ENST00000552188 LRRFIP2Q9Y608 721 aaKnown RBP7.35□□□□□ -1.23
CCDC65-204ENST00000552188 ZNF646O15015 1829 aaPredicted RBP7.34□□□□□ -1.23
CCDC65-204ENST00000552188 MYO3BQ8WXR4 1341 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 WTIPA6NIX2 430 aaPredicted RBP7.34□□□□□ -1.23
CCDC65-204ENST00000552188 GNAI2P04899 355 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 IFIT1P09914 478 aaKnown RBP7.34□□□□□ -1.23
CCDC65-204ENST00000552188 USP17L8P0C7I0 530 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 HIBADHP31937 336 aaKnown RBP7.34□□□□□ -1.23
CCDC65-204ENST00000552188 GTF2IP78347 998 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 HTRA3P83110 453 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 UBE4AQ14139 1066 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 LRRC24Q50LG9 513 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 STRIP1Q5VSL9 837 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 LHX8Q68G74 356 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 SAMD7Q7Z3H4 446 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 ITPRIPQ8IWB1 547 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 PLPP6Q8IY26 295 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 DZIP1LQ8IYY4 767 aaKnown RBP7.34□□□□□ -1.23
CCDC65-204ENST00000552188 ANKRD44Q8N8A2 993 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.34□□□□□ -1.23
CCDC65-204ENST00000552188 KLHDC4Q8TBB5 520 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 YTHDC1Q96MU7 727 aaKnown RBP7.34□□□□□ -1.23
CCDC65-204ENST00000552188 MEIS3Q99687 375 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 SIL1Q9H173 461 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 CD209Q9NNX6 404 aa7.34□□□□□ -1.23
CCDC65-204ENST00000552188 ARAP2Q8WZ64 1704 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 AK9Q5TCS8 1911 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 TMEM88BA6NKF7 163 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 SNAP23O00161 211 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 EYA2O00167 538 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 SRGAP3O43295 1099 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 SLC5A1P13866 664 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 KLRK1P26718 216 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 FOXK1P85037 733 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 E2F4Q16254 413 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 KIF4BQ2VIQ3 1234 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 CDC37L1Q7L3B6 337 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 TXNRD3Q86VQ6 643 aa7.33□□□□□ -1.24
CCDC65-204ENST00000552188 TMEM57Q8N5G2 664 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms