RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 ALDH1A1P00352 501 aa27.67■■■□□ 2.02
SMARCD1-212ENST00000551966 INHBEP58166 350 aa27.67■■■□□ 2.02
SMARCD1-212ENST00000551966 FOXO4P98177 505 aa27.67■■■□□ 2.02
SMARCD1-212ENST00000551966 LINS1Q8NG48 757 aa27.67■■■□□ 2.02
SMARCD1-212ENST00000551966 PRMT6Q96LA8 375 aaPredicted RBP27.67■■■□□ 2.02
SMARCD1-212ENST00000551966 AOX1Q06278 1338 aa27.67■■■□□ 2.02
SMARCD1-212ENST00000551966 COL1A1P02452 1464 aaPredicted RBP27.66■■■□□ 2.02
SMARCD1-212ENST00000551966 ANKRD18BA2A2Z9 1011 aa27.66■■■□□ 2.02
SMARCD1-212ENST00000551966 MYH16Q9H6N6 1097 aa27.66■■■□□ 2.02
SMARCD1-212ENST00000551966 F8W031 263 aaPredicted RBP27.65■■■□□ 2.02
SMARCD1-212ENST00000551966 IGF2BP3O00425 579 aaKnown RBP eCLIP27.65■■■□□ 2.02
SMARCD1-212ENST00000551966 IL1R1P14778 569 aa27.65■■■□□ 2.02
SMARCD1-212ENST00000551966 FKBP5Q13451 457 aaPredicted RBP27.65■■■□□ 2.02
SMARCD1-212ENST00000551966 CFAP100Q494V2 611 aa27.65■■■□□ 2.02
SMARCD1-212ENST00000551966 WNK4Q96J92 1243 aa27.65■■■□□ 2.02
SMARCD1-212ENST00000551966 CLRN2A0PK11 232 aa27.64■■■□□ 2.02
SMARCD1-212ENST00000551966 ZBTB48P10074 688 aaPredicted RBP27.64■■■□□ 2.02
SMARCD1-212ENST00000551966 NBPF12Q5TAG4 269 aaPredicted RBP27.64■■■□□ 2.02
SMARCD1-212ENST00000551966 PPP2R3BQ9Y5P8 575 aa27.64■■■□□ 2.02
SMARCD1-212ENST00000551966 PPP1R12BO60237 982 aaPredicted RBP27.63■■■□□ 2.01
SMARCD1-212ENST00000551966 USP2O75604 605 aaPredicted RBP27.63■■■□□ 2.01
SMARCD1-212ENST00000551966 OTOP1Q7RTM1 612 aa27.63■■■□□ 2.01
SMARCD1-212ENST00000551966 TRIM17Q9Y577 477 aa27.63■■■□□ 2.01
SMARCD1-212ENST00000551966 SPDYE2BA6NHP3 402 aa27.62■■■□□ 2.01
SMARCD1-212ENST00000551966 SPDYE6P0CI01 402 aa27.62■■■□□ 2.01
SMARCD1-212ENST00000551966 GJA5P36382 358 aa27.62■■■□□ 2.01
SMARCD1-212ENST00000551966 JAG2Q9Y219 1238 aa27.62■■■□□ 2.01
SMARCD1-212ENST00000551966 VAMP4O75379 141 aa27.61■■■□□ 2.01
SMARCD1-212ENST00000551966 FKBP1AP62942 108 aaKnown RBP27.61■■■□□ 2.01
SMARCD1-212ENST00000551966 IFIT5Q13325 482 aaKnown RBP27.61■■■□□ 2.01
SMARCD1-212ENST00000551966 IL16Q14005 1332 aa27.61■■■□□ 2.01
SMARCD1-212ENST00000551966 UNCXA6NJT0 531 aa27.6■■■□□ 2.01
SMARCD1-212ENST00000551966 SUPT20HL1Q3ZLR7 823 aa27.6■■■□□ 2.01
SMARCD1-212ENST00000551966 EPHA10Q5JZY3 1008 aa27.59■■■□□ 2.01
SMARCD1-212ENST00000551966 ZNF804AQ7Z570 1209 aa27.59■■■□□ 2.01
SMARCD1-212ENST00000551966 ZNF594Q96JF6 807 aaPredicted RBP27.59■■■□□ 2.01
SMARCD1-212ENST00000551966 PTPN18Q99952 460 aa27.59■■■□□ 2.01
SMARCD1-212ENST00000551966 VEZTQ9HBM0 779 aa27.59■■■□□ 2.01
SMARCD1-212ENST00000551966 POTEFA5A3E0 1075 aa27.58■■■□□ 2.01
SMARCD1-212ENST00000551966 F6X3S4 739 aa27.58■■■□□ 2.01
SMARCD1-212ENST00000551966 MYO1BO43795 1136 aa27.58■■■□□ 2.01
SMARCD1-212ENST00000551966 BEND3Q5T5X7 828 aa27.58■■■□□ 2.01
SMARCD1-212ENST00000551966 CHMP3Q9Y3E7 222 aa27.58■■■□□ 2.01
SMARCD1-212ENST00000551966 ECM29Q5VYK3 1845 aa27.57■■■□□ 2
SMARCD1-212ENST00000551966 PLIN1O60240 522 aa27.57■■■□□ 2
SMARCD1-212ENST00000551966 CAP1Q01518 475 aa27.57■■■□□ 2
SMARCD1-212ENST00000551966 RASA3Q14644 834 aa27.57■■■□□ 2
SMARCD1-212ENST00000551966 LMBR1LQ6UX01 489 aa27.57■■■□□ 2
SMARCD1-212ENST00000551966 A0A1B0GUL6 1792 aa27.56■■■□□ 2
SMARCD1-212ENST00000551966 CRHR2Q13324 411 aa27.56■■■□□ 2
SMARCD1-212ENST00000551966 CD99L2Q8TCZ2 262 aa27.56■■■□□ 2
SMARCD1-212ENST00000551966 PTPN22Q9Y2R2 807 aa27.56■■■□□ 2
SMARCD1-212ENST00000551966 FANCIQ9NVI1 1328 aa27.56■■■□□ 2
SMARCD1-212ENST00000551966 LAMB1P07942 1786 aa27.55■■■□□ 2
SMARCD1-212ENST00000551966 TESPA1A2RU30 521 aaPredicted RBP27.55■■■□□ 2
SMARCD1-212ENST00000551966 IREB2P48200 963 aaKnown RBP27.55■■■□□ 2
SMARCD1-212ENST00000551966 RBM5P52756 815 aaKnown RBP eCLIP27.55■■■□□ 2
SMARCD1-212ENST00000551966 NCBP3Q53F19 620 aaKnown RBP27.54■■■□□ 2
SMARCD1-212ENST00000551966 INTS3Q68E01 1043 aaKnown RBP27.54■■■□□ 2
SMARCD1-212ENST00000551966 LDHAL6AQ6ZMR3 332 aa27.54■■■□□ 2
SMARCD1-212ENST00000551966 ANKRD13AQ8IZ07 590 aa27.54■■■□□ 2
SMARCD1-212ENST00000551966 FAM205AQ6ZU69 1335 aa27.53■■■□□ 2
SMARCD1-212ENST00000551966 EXOSC9Q06265 439 aaKnown RBP27.53■■■□□ 2
SMARCD1-212ENST00000551966 ERO1AQ96HE7 468 aa27.53■■■□□ 2
SMARCD1-212ENST00000551966 ZNF70Q9UC06 446 aaPredicted RBP27.53■■■□□ 2
SMARCD1-212ENST00000551966 TDRD7Q8NHU6 1098 aaKnown RBP27.52■■■□□ 2
SMARCD1-212ENST00000551966 HTTP42858 3142 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 CCDC57Q2TAC2 916 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 SPDYE2Q495Y8 402 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 OTUD7BQ6GQQ9 843 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 CDAN1Q8IWY9 1227 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 MS4A4AQ96JQ5 239 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 TEPSINQ96N21 525 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 TDRD3Q9H7E2 651 aaKnown RBP27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 ELP3Q9H9T3 547 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 CACNA1FO60840 1977 aa27.51■■□□□ 1.99
SMARCD1-212ENST00000551966 SP3Q02447 781 aa27.5■■□□□ 1.99
SMARCD1-212ENST00000551966 EFCC1Q9HA90 598 aa27.5■■□□□ 1.99
SMARCD1-212ENST00000551966 CNNM1Q9NRU3 951 aa27.5■■□□□ 1.99
SMARCD1-212ENST00000551966 GYG1P46976 350 aa27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 MFSD14BQ5SR56 506 aa27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 ARMC5Q96C12 935 aa27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 OPTNQ96CV9 577 aa27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 FAM84BQ96KN1 310 aaPredicted RBP27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 SERPINA10Q9UK55 444 aa27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 TTF2Q9UNY4 1162 aaKnown RBP27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 SALL2Q9Y467 1007 aaPredicted RBP27.49■■□□□ 1.99
SMARCD1-212ENST00000551966 GRM8O00222 908 aa27.48■■□□□ 1.99
SMARCD1-212ENST00000551966 WDR63Q8IWG1 891 aa27.48■■□□□ 1.99
SMARCD1-212ENST00000551966 CNKSR2Q8WXI2 1034 aa27.48■■□□□ 1.99
SMARCD1-212ENST00000551966 PUS3Q9BZE2 481 aaKnown RBP27.48■■□□□ 1.99
SMARCD1-212ENST00000551966 EN2P19622 333 aaPredicted RBP27.47■■□□□ 1.99
SMARCD1-212ENST00000551966 UBE4AQ14139 1066 aa27.47■■□□□ 1.99
SMARCD1-212ENST00000551966 TAF7LQ5H9L4 462 aa27.47■■□□□ 1.99
SMARCD1-212ENST00000551966 DZIP1LQ8IYY4 767 aaKnown RBP27.47■■□□□ 1.99
SMARCD1-212ENST00000551966 GCC1Q96CN9 775 aa27.47■■□□□ 1.99
SMARCD1-212ENST00000551966 SPINK5Q9NQ38 1064 aaPredicted RBP27.47■■□□□ 1.99
SMARCD1-212ENST00000551966 HIBADHP31937 336 aaKnown RBP27.46■■□□□ 1.99
SMARCD1-212ENST00000551966 TNFAIP1Q13829 316 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms