RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
CACNB3-220ENST00000551716 KIF22Q14807 665 aa19.68■□□□□ 0.74
CACNB3-220ENST00000551716 RALBP1Q15311 655 aa19.68■□□□□ 0.74
CACNB3-220ENST00000551716 MPHOSPH8Q99549 860 aa19.68■□□□□ 0.74
CACNB3-220ENST00000551716 MBIPQ9NS73 344 aa19.68■□□□□ 0.74
CACNB3-220ENST00000551716 SPDYE2BA6NHP3 402 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 SPDYE6P0CI01 402 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 PRMT2P55345 433 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 FKBP1AP62942 108 aaKnown RBP19.67■□□□□ 0.74
CACNB3-220ENST00000551716 TNFAIP1Q13829 316 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 TAF1CQ15572 869 aaPredicted RBP19.67■□□□□ 0.74
CACNB3-220ENST00000551716 CFAP100Q494V2 611 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 CHRDL2Q6WN34 429 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 CCDC146Q8IYE0 955 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 SLC17A8Q8NDX2 589 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 OPTNQ96CV9 577 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 MS4A4AQ96JQ5 239 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 VEZTQ9HBM0 779 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 MAP3K2Q9Y2U5 619 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 BRCA2P51587 3418 aa19.67■□□□□ 0.74
CACNB3-220ENST00000551716 RASA3Q14644 834 aa19.66■□□□□ 0.74
CACNB3-220ENST00000551716 CCDC30Q5VVM6 783 aa19.66■□□□□ 0.74
CACNB3-220ENST00000551716 DPF3Q92784 378 aa19.66■□□□□ 0.74
CACNB3-220ENST00000551716 PRMT6Q96LA8 375 aaPredicted RBP19.66■□□□□ 0.74
CACNB3-220ENST00000551716 CLRN2A0PK11 232 aa19.65■□□□□ 0.74
CACNB3-220ENST00000551716 CAP1Q01518 475 aa19.65■□□□□ 0.74
CACNB3-220ENST00000551716 CALD1Q05682 793 aaKnown RBP19.65■□□□□ 0.74
CACNB3-220ENST00000551716 KSR2Q6VAB6 950 aa19.65■□□□□ 0.74
CACNB3-220ENST00000551716 NKX2-3Q8TAU0 364 aa19.65■□□□□ 0.74
CACNB3-220ENST00000551716 ELP3Q9H9T3 547 aa19.65■□□□□ 0.74
CACNB3-220ENST00000551716 SSC5DA1L4H1 1573 aa19.65■□□□□ 0.74
CACNB3-220ENST00000551716 CCL15-CCL14A0A0B4J2E2 113 aa19.64■□□□□ 0.73
CACNB3-220ENST00000551716 CCL15Q16663 113 aa19.64■□□□□ 0.73
CACNB3-220ENST00000551716 C15orf52Q6ZUT6 534 aaKnown RBP19.64■□□□□ 0.73
CACNB3-220ENST00000551716 RBM27Q9P2N5 1060 aaKnown RBP19.64■□□□□ 0.73
CACNB3-220ENST00000551716 ELL2O00472 640 aaPredicted RBP19.63■□□□□ 0.73
CACNB3-220ENST00000551716 IGKV5-2P06315 115 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 ZNF853P0CG23 659 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 ITGA6P23229 1130 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 KLRK1P26718 216 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 RBM5P52756 815 aaKnown RBP eCLIP19.63■□□□□ 0.73
CACNB3-220ENST00000551716 GNAI1P63096 354 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 CERS5Q8N5B7 392 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 BRI3BPQ8WY22 251 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 ZCCHC17Q9NP64 241 aaKnown RBP19.63■□□□□ 0.73
CACNB3-220ENST00000551716 IFT57Q9NWB7 429 aa19.63■□□□□ 0.73
CACNB3-220ENST00000551716 F8W031 263 aaPredicted RBP19.62■□□□□ 0.73
CACNB3-220ENST00000551716 MYCP01106 439 aaPredicted RBP19.62■□□□□ 0.73
CACNB3-220ENST00000551716 MAP3K9P80192 1104 aa19.62■□□□□ 0.73
CACNB3-220ENST00000551716 WDR43Q15061 677 aaKnown RBP eCLIP19.62■□□□□ 0.73
CACNB3-220ENST00000551716 ZNF804AQ7Z570 1209 aa19.62■□□□□ 0.73
CACNB3-220ENST00000551716 HTATIP2Q9BUP3 242 aa19.62■□□□□ 0.73
CACNB3-220ENST00000551716 PLA2G12BQ9BX93 195 aa19.62■□□□□ 0.73
CACNB3-220ENST00000551716 CSADQ9Y600 493 aa19.62■□□□□ 0.73
CACNB3-220ENST00000551716 SZT2Q5T011 3432 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 PI4KAP2A4QPH2 592 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 H7C1W4 665 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 TLR2O60603 784 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 IL1R1P14778 569 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 CHRNDQ07001 517 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 PI4KAP1Q8N8J0 262 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 HELBQ8NG08 1087 aaPredicted RBP19.61■□□□□ 0.73
CACNB3-220ENST00000551716 SH3TC2Q8TF17 1288 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 NR2E3Q9Y5X4 410 aa19.61■□□□□ 0.73
CACNB3-220ENST00000551716 LAMB1P07942 1786 aa19.6■□□□□ 0.73
CACNB3-220ENST00000551716 LACTBP83111 547 aaPredicted RBP19.6■□□□□ 0.73
CACNB3-220ENST00000551716 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.6■□□□□ 0.73
CACNB3-220ENST00000551716 PCDHAC2Q9Y5I4 1007 aa19.6■□□□□ 0.73
CACNB3-220ENST00000551716 NEURL1BA8MQ27 555 aa19.59■□□□□ 0.73
CACNB3-220ENST00000551716 CSF1RP07333 972 aa19.59■□□□□ 0.73
CACNB3-220ENST00000551716 CETPP11597 493 aa19.59■□□□□ 0.73
CACNB3-220ENST00000551716 HOXD10P28358 340 aa19.59■□□□□ 0.73
CACNB3-220ENST00000551716 UBE3BQ7Z3V4 1068 aa19.59■□□□□ 0.73
CACNB3-220ENST00000551716 FAM43AQ8N2R8 423 aa19.59■□□□□ 0.73
CACNB3-220ENST00000551716 A0A1W2PPC1 479 aa19.58■□□□□ 0.72
CACNB3-220ENST00000551716 TNNI2P48788 182 aa19.58■□□□□ 0.72
CACNB3-220ENST00000551716 SPDYE2Q495Y8 402 aa19.58■□□□□ 0.72
CACNB3-220ENST00000551716 ZNF70Q9UC06 446 aaPredicted RBP19.58■□□□□ 0.72
CACNB3-220ENST00000551716 SERPINA10Q9UK55 444 aa19.58■□□□□ 0.72
CACNB3-220ENST00000551716 ZNF646O15015 1829 aaPredicted RBP19.58■□□□□ 0.72
CACNB3-220ENST00000551716 ANKRD18BA2A2Z9 1011 aa19.57■□□□□ 0.72
CACNB3-220ENST00000551716 VGLL4Q14135 290 aa19.57■□□□□ 0.72
CACNB3-220ENST00000551716 CWF19L2Q2TBE0 894 aaKnown RBP19.57■□□□□ 0.72
CACNB3-220ENST00000551716 C8orf58Q8NAV2 365 aa19.57■□□□□ 0.72
CACNB3-220ENST00000551716 CAPN2P17655 700 aa19.56■□□□□ 0.72
CACNB3-220ENST00000551716 STK31Q9BXU1 1019 aa19.56■□□□□ 0.72
CACNB3-220ENST00000551716 IRS2Q9Y4H2 1338 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 SPDYE5A6NIY4 337 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 GJB1P08034 283 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 GJA8P48165 433 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 SNAPC2Q13487 334 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 GCKRQ14397 625 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 ERO1BQ86YB8 467 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.55■□□□□ 0.72
CACNB3-220ENST00000551716 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 TEPSINQ96N21 525 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 PRO3102Q9H379 93 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 MYH16Q9H6N6 1097 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 ADAMTS8Q9UP79 889 aa19.55■□□□□ 0.72
CACNB3-220ENST00000551716 TAF5LO75529 589 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms