RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 F8W031 263 aaPredicted RBP13.22□□□□□ -0.29
BEST3-210ENST00000551160 SUPT20HL1Q3ZLR7 823 aa13.22□□□□□ -0.29
BEST3-210ENST00000551160 NBPF11Q86T75 865 aa13.22□□□□□ -0.29
BEST3-210ENST00000551160 BRI3BPQ8WY22 251 aa13.22□□□□□ -0.29
BEST3-210ENST00000551160 OPTNQ96CV9 577 aa13.22□□□□□ -0.29
BEST3-210ENST00000551160 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
BEST3-210ENST00000551160 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
BEST3-210ENST00000551160 ARHGAP39Q9C0H5 1083 aa13.22□□□□□ -0.29
BEST3-210ENST00000551160 LEMD3Q9Y2U8 911 aa13.22□□□□□ -0.29
BEST3-210ENST00000551160 CUL9Q8IWT3 2517 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 UNCXA6NJT0 531 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 TAF1CQ15572 869 aaPredicted RBP13.21□□□□□ -0.29
BEST3-210ENST00000551160 CFAP100Q494V2 611 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 ANKRD13AQ8IZ07 590 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 MTMR14Q8NCE2 650 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 SLC17A8Q8NDX2 589 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 SHISA4Q96DD7 197 aa13.21□□□□□ -0.29
BEST3-210ENST00000551160 SNAP23O00161 211 aa13.2□□□□□ -0.3
BEST3-210ENST00000551160 ELL2O00472 640 aaPredicted RBP13.2□□□□□ -0.3
BEST3-210ENST00000551160 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
BEST3-210ENST00000551160 RASA3Q14644 834 aa13.2□□□□□ -0.3
BEST3-210ENST00000551160 CDAN1Q8IWY9 1227 aa13.2□□□□□ -0.3
BEST3-210ENST00000551160 FAM43AQ8N2R8 423 aa13.2□□□□□ -0.3
BEST3-210ENST00000551160 PRMT6Q96LA8 375 aaPredicted RBP13.2□□□□□ -0.3
BEST3-210ENST00000551160 CD209Q9NNX6 404 aa13.2□□□□□ -0.3
BEST3-210ENST00000551160 JAG2Q9Y219 1238 aa13.2□□□□□ -0.3
BEST3-210ENST00000551160 CCL15-CCL14A0A0B4J2E2 113 aa13.19□□□□□ -0.3
BEST3-210ENST00000551160 MYO1BO43795 1136 aa13.19□□□□□ -0.3
BEST3-210ENST00000551160 IGHMBP2P38935 993 aaKnown RBP13.19□□□□□ -0.3
BEST3-210ENST00000551160 CCL15Q16663 113 aa13.19□□□□□ -0.3
BEST3-210ENST00000551160 DPF3Q92784 378 aa13.19□□□□□ -0.3
BEST3-210ENST00000551160 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
BEST3-210ENST00000551160 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
BEST3-210ENST00000551160 IRS2Q9Y4H2 1338 aa13.18□□□□□ -0.3
BEST3-210ENST00000551160 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
BEST3-210ENST00000551160 KCNJ4P48050 445 aa13.18□□□□□ -0.3
BEST3-210ENST00000551160 ARHGEF6Q15052 776 aa13.18□□□□□ -0.3
BEST3-210ENST00000551160 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
BEST3-210ENST00000551160 ANKRD2Q9GZV1 360 aa13.18□□□□□ -0.3
BEST3-210ENST00000551160 PRO3102Q9H379 93 aa13.18□□□□□ -0.3
BEST3-210ENST00000551160 ZNF853P0CG23 659 aa13.17□□□□□ -0.3
BEST3-210ENST00000551160 ITGA6P23229 1130 aa13.17□□□□□ -0.3
BEST3-210ENST00000551160 CHRNDQ07001 517 aa13.17□□□□□ -0.3
BEST3-210ENST00000551160 VGLL4Q14135 290 aa13.17□□□□□ -0.3
BEST3-210ENST00000551160 MTFR1Q15390 333 aa13.17□□□□□ -0.3
BEST3-210ENST00000551160 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
BEST3-210ENST00000551160 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
BEST3-210ENST00000551160 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
BEST3-210ENST00000551160 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
BEST3-210ENST00000551160 GTF2A2P52657 109 aa13.16□□□□□ -0.3
BEST3-210ENST00000551160 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
BEST3-210ENST00000551160 LACTBP83111 547 aaPredicted RBP13.16□□□□□ -0.3
BEST3-210ENST00000551160 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
BEST3-210ENST00000551160 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
BEST3-210ENST00000551160 TEPSINQ96N21 525 aa13.16□□□□□ -0.3
BEST3-210ENST00000551160 MPHOSPH8Q99549 860 aa13.16□□□□□ -0.3
BEST3-210ENST00000551160 LAMB1P07942 1786 aa13.16□□□□□ -0.3
BEST3-210ENST00000551160 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
BEST3-210ENST00000551160 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
BEST3-210ENST00000551160 TAF5LO75529 589 aa13.15□□□□□ -0.3
BEST3-210ENST00000551160 SPDYE2Q495Y8 402 aa13.15□□□□□ -0.3
BEST3-210ENST00000551160 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
BEST3-210ENST00000551160 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
BEST3-210ENST00000551160 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
BEST3-210ENST00000551160 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
BEST3-210ENST00000551160 H7C1W4 665 aa13.14□□□□□ -0.31
BEST3-210ENST00000551160 TLR2O60603 784 aa13.14□□□□□ -0.31
BEST3-210ENST00000551160 IL1R1P14778 569 aa13.14□□□□□ -0.31
BEST3-210ENST00000551160 CTGFP29279 349 aa13.14□□□□□ -0.31
BEST3-210ENST00000551160 KIF22Q14807 665 aa13.14□□□□□ -0.31
BEST3-210ENST00000551160 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
BEST3-210ENST00000551160 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.14□□□□□ -0.31
BEST3-210ENST00000551160 TMEM39BQ9GZU3 492 aa13.14□□□□□ -0.31
BEST3-210ENST00000551160 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 BTBD19C9JJ37 291 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 FKBP1AP62942 108 aaKnown RBP13.13□□□□□ -0.31
BEST3-210ENST00000551160 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
BEST3-210ENST00000551160 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 PLA2G12BQ9BX93 195 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 TDRD3Q9H7E2 651 aaKnown RBP13.13□□□□□ -0.31
BEST3-210ENST00000551160 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
BEST3-210ENST00000551160 ZSWIM8A7E2V4 1837 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 SPDYE5A6NIY4 337 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
BEST3-210ENST00000551160 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 CSADQ9Y600 493 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 A0A0C4DFX4 3053 aa13.12□□□□□ -0.31
BEST3-210ENST00000551160 LAMA3Q16787 3333 aa13.11□□□□□ -0.31
BEST3-210ENST00000551160 CSF1RP07333 972 aa13.11□□□□□ -0.31
BEST3-210ENST00000551160 CETPP11597 493 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms