RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 LRP5O75197 1615 aa18.38■□□□□ 0.53
SCN8A-206ENST00000550891 TRDNQ13061 729 aa18.38■□□□□ 0.53
SCN8A-206ENST00000550891 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
SCN8A-206ENST00000550891 BCORQ6W2J9 1755 aa18.38■□□□□ 0.53
SCN8A-206ENST00000550891 TTLL5Q6EMB2 1281 aa18.38■□□□□ 0.53
SCN8A-206ENST00000550891 KRT27Q7Z3Y8 459 aa18.38■□□□□ 0.53
SCN8A-206ENST00000550891 FGAP02671 866 aa18.37■□□□□ 0.53
SCN8A-206ENST00000550891 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
SCN8A-206ENST00000550891 UBE4AQ14139 1066 aa18.37■□□□□ 0.53
SCN8A-206ENST00000550891 LARP1BQ659C4 914 aaKnown RBP18.37■□□□□ 0.53
SCN8A-206ENST00000550891 C3orf67Q6ZVT6 689 aa18.37■□□□□ 0.53
SCN8A-206ENST00000550891 MAGEB6Q8N7X4 407 aa18.37■□□□□ 0.53
SCN8A-206ENST00000550891 STOX1Q6ZVD7 989 aa18.36■□□□□ 0.53
SCN8A-206ENST00000550891 CCDC24Q8N4L8 307 aa18.36■□□□□ 0.53
SCN8A-206ENST00000550891 CHMP4CQ96CF2 233 aa18.36■□□□□ 0.53
SCN8A-206ENST00000550891 LMBRD1Q9NUN5 540 aa18.36■□□□□ 0.53
SCN8A-206ENST00000550891 WWC3Q9ULE0 1092 aa18.36■□□□□ 0.53
SCN8A-206ENST00000550891 DDX60Q8IY21 1712 aaKnown RBP18.36■□□□□ 0.53
SCN8A-206ENST00000550891 ADRA2BP18089 450 aa18.36■□□□□ 0.53
SCN8A-206ENST00000550891 COL9A3Q14050 684 aaPredicted RBP18.36■□□□□ 0.53
SCN8A-206ENST00000550891 HMGB2P26583 209 aaKnown RBP18.35■□□□□ 0.53
SCN8A-206ENST00000550891 CELF1Q92879 486 aaKnown RBP18.35■□□□□ 0.53
SCN8A-206ENST00000550891 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
SCN8A-206ENST00000550891 MINPP1Q9UNW1 487 aa18.35■□□□□ 0.53
SCN8A-206ENST00000550891 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
SCN8A-206ENST00000550891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
SCN8A-206ENST00000550891 MBD3O95983 291 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 FAM184AQ8NB25 1140 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 F13A1P00488 732 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 ANKRD2Q9GZV1 360 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 KIF3AQ9Y496 699 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 TRIM37O94972 964 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 GYG1P46976 350 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 CAVIN1Q6NZI2 390 aaKnown RBP18.34■□□□□ 0.53
SCN8A-206ENST00000550891 GTF3C6Q969F1 213 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 CHAMP1Q96JM3 812 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
SCN8A-206ENST00000550891 SCN7AQ01118 1682 aa18.33■□□□□ 0.53
SCN8A-206ENST00000550891 LAMB2P55268 1798 aa18.33■□□□□ 0.53
SCN8A-206ENST00000550891 CSPP1Q1MSJ5 1256 aa18.33■□□□□ 0.53
SCN8A-206ENST00000550891 SLC27A3Q5K4L6 730 aa18.33■□□□□ 0.53
SCN8A-206ENST00000550891 ISY1Q9ULR0 285 aaKnown RBP18.33■□□□□ 0.53
SCN8A-206ENST00000550891 MCM5P33992 734 aa18.33■□□□□ 0.52
SCN8A-206ENST00000550891 RAI14Q9P0K7 980 aa18.33■□□□□ 0.52
SCN8A-206ENST00000550891 DTNBO60941 627 aa18.33■□□□□ 0.52
SCN8A-206ENST00000550891 CHST3Q7LGC8 479 aa18.33■□□□□ 0.52
SCN8A-206ENST00000550891 NACAP1Q9BZK3 213 aa18.33■□□□□ 0.52
SCN8A-206ENST00000550891 NAPBQ9H115 298 aa18.33■□□□□ 0.52
SCN8A-206ENST00000550891 A0A0G2JLW4 131 aa18.32■□□□□ 0.52
SCN8A-206ENST00000550891 MBD4O95243 580 aa18.32■□□□□ 0.52
SCN8A-206ENST00000550891 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
SCN8A-206ENST00000550891 ST3GAL1Q11201 340 aa18.32■□□□□ 0.52
SCN8A-206ENST00000550891 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
SCN8A-206ENST00000550891 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
SCN8A-206ENST00000550891 NFIXQ14938 502 aa18.31■□□□□ 0.52
SCN8A-206ENST00000550891 H3BQV1 296 aa18.31■□□□□ 0.52
SCN8A-206ENST00000550891 IFFO2Q5TF58 517 aa18.31■□□□□ 0.52
SCN8A-206ENST00000550891 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
SCN8A-206ENST00000550891 AKAP11Q9UKA4 1901 aa18.31■□□□□ 0.52
SCN8A-206ENST00000550891 EXOSC10Q01780 885 aaKnown RBP18.31■□□□□ 0.52
SCN8A-206ENST00000550891 MTMR6Q9Y217 621 aa18.31■□□□□ 0.52
SCN8A-206ENST00000550891 GNAT2P19087 354 aa18.3■□□□□ 0.52
SCN8A-206ENST00000550891 STRBPQ96SI9 672 aaKnown RBP18.3■□□□□ 0.52
SCN8A-206ENST00000550891 PRC1O43663 620 aa18.3■□□□□ 0.52
SCN8A-206ENST00000550891 SYAP1Q96A49 352 aaPredicted RBP18.3■□□□□ 0.52
SCN8A-206ENST00000550891 GDPD2Q9HCC8 539 aa18.3■□□□□ 0.52
SCN8A-206ENST00000550891 TCRBV5S4A2TA0A5A2 114 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 TDO2P48775 406 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 ST5P78524 1137 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
SCN8A-206ENST00000550891 ARMT1Q9H993 441 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 C4BP0C0L5 1744 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 PATL2C9JE40 543 aaKnown RBP18.29■□□□□ 0.52
SCN8A-206ENST00000550891 PFKFB2O60825 505 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 CYP7A1P22680 504 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 DDX11Q96FC9 970 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 LLPHQ9BRT6 129 aaKnown RBP18.29■□□□□ 0.52
SCN8A-206ENST00000550891 MYH7P12883 1935 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 FOXP2O15409 715 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 MRE11P49959 708 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
SCN8A-206ENST00000550891 HMGN5P82970 282 aaKnown RBP18.29■□□□□ 0.52
SCN8A-206ENST00000550891 ANKIB1Q9P2G1 1089 aa18.29■□□□□ 0.52
SCN8A-206ENST00000550891 FIBPO43427 364 aa18.28■□□□□ 0.52
SCN8A-206ENST00000550891 SCRN1Q12765 414 aa18.28■□□□□ 0.52
SCN8A-206ENST00000550891 ZNF274Q96GC6 653 aaPredicted RBP18.28■□□□□ 0.52
SCN8A-206ENST00000550891 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
SCN8A-206ENST00000550891 ZNF804BA4D1E1 1349 aa18.28■□□□□ 0.52
SCN8A-206ENST00000550891 LY75O60449 1722 aa18.28■□□□□ 0.52
SCN8A-206ENST00000550891 ARAP2Q8WZ64 1704 aa18.28■□□□□ 0.52
SCN8A-206ENST00000550891 DHX16O60231 1041 aaKnown RBP18.27■□□□□ 0.52
SCN8A-206ENST00000550891 HIBADHP31937 336 aaKnown RBP18.27■□□□□ 0.52
SCN8A-206ENST00000550891 ZNF772Q68DY9 489 aaPredicted RBP18.27■□□□□ 0.52
SCN8A-206ENST00000550891 USP48Q86UV5 1035 aa18.27■□□□□ 0.52
SCN8A-206ENST00000550891 FERMT3Q86UX7 667 aa18.27■□□□□ 0.52
SCN8A-206ENST00000550891 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
SCN8A-206ENST00000550891 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
SCN8A-206ENST00000550891 SEMA3EO15041 775 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms