RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 GLYCTKQ8IVS8 523 aa6.64□□□□□ -1.35
TSPAN8-205ENST00000550818 KLHL23Q8NBE8 558 aa6.64□□□□□ -1.35
TSPAN8-205ENST00000550818 HELQQ8TDG4 1101 aa6.64□□□□□ -1.35
TSPAN8-205ENST00000550818 FBXL18Q96ME1 805 aa6.64□□□□□ -1.35
TSPAN8-205ENST00000550818 BIN2Q9UBW5 565 aaPredicted RBP6.64□□□□□ -1.35
TSPAN8-205ENST00000550818 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
TSPAN8-205ENST00000550818 SART1O43290 800 aaKnown RBP6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 CDC27P30260 824 aa6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 MTMR3Q13615 1198 aa6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 ZNF648Q5T619 568 aaPredicted RBP6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 COL13A1Q5TAT6 717 aaPredicted RBP6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 ANKRD34AQ69YU3 496 aa6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 C16orf46Q6P387 395 aa6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 TP53INP2Q8IXH6 220 aa6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 MYO19Q96H55 970 aa6.63□□□□□ -1.35
TSPAN8-205ENST00000550818 F13BP05160 661 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 ECM1Q16610 540 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 CEP135Q66GS9 1140 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 KLHDC7BQ96G42 594 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 SAP130Q9H0E3 1048 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 LRFN2Q9ULH4 789 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
TSPAN8-205ENST00000550818 NPR3P17342 541 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 EPHA1P21709 976 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 ZNF124Q15973 351 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 COX20Q5RI15 118 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 NLRP13Q86W25 1043 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 TREML1Q86YW5 311 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 SHISA5Q8N114 240 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 FBXL6Q8N531 539 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 ATG3Q9NT62 314 aa6.61□□□□□ -1.35
TSPAN8-205ENST00000550818 FAM13AO94988 1023 aa6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 MAP4P27816 1152 aaKnown RBP6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 ARHGAP4P98171 946 aa6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 TRIP4Q15650 581 aaPredicted RBP6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 DNAJC14Q6Y2X3 702 aaPredicted RBP6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 NPM2Q86SE8 214 aaKnown RBP6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
TSPAN8-205ENST00000550818 DBX1A6NMT0 343 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 TNFRSF10BO14763 440 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 PAPLNO95428 1278 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 ERCC3P19447 782 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 GIMAP7Q8NHV1 300 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 RNF208Q9H0X6 261 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 RASSF4Q9H2L5 321 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 STIM2Q9P246 746 aa6.59□□□□□ -1.35
TSPAN8-205ENST00000550818 SMNDC1O75940 238 aaKnown RBP eCLIP6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 MPSTP25325 297 aa6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 CPSF6Q16630 551 aaKnown RBP eCLIP6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 SGO2Q562F6 1265 aa6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 NOM1Q5C9Z4 860 aaKnown RBP6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 FAM117BQ6P1L5 589 aa6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 OSBPL1AQ9BXW6 950 aa6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 PAK6Q9NQU5 681 aaPredicted RBP6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 SEC31BQ9NQW1 1179 aa6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 AMOTL2Q9Y2J4 779 aa6.58□□□□□ -1.36
TSPAN8-205ENST00000550818 HYAL2Q12891 473 aa6.57□□□□□ -1.36
TSPAN8-205ENST00000550818 LCE5AQ5TCM9 118 aa6.57□□□□□ -1.36
TSPAN8-205ENST00000550818 BSDC1Q9NW68 430 aaPredicted RBP6.57□□□□□ -1.36
TSPAN8-205ENST00000550818 DCTN4Q9UJW0 460 aa6.57□□□□□ -1.36
TSPAN8-205ENST00000550818 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
TSPAN8-205ENST00000550818 BRD2P25440 801 aaKnown RBP6.56□□□□□ -1.36
TSPAN8-205ENST00000550818 ALKBH2Q6NS38 261 aa6.56□□□□□ -1.36
TSPAN8-205ENST00000550818 FDX2Q6P4F2 183 aa6.56□□□□□ -1.36
TSPAN8-205ENST00000550818 ABTB2Q8N961 1025 aa6.56□□□□□ -1.36
TSPAN8-205ENST00000550818 GAS2O43903 313 aaKnown RBP6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 MAPK1P28482 360 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 EIF1AXP47813 144 aaKnown RBP6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 FAM26DQ5JW98 314 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 SPACA7Q96KW9 195 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 ASB16Q96NS5 453 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 POP1Q99575 1024 aaKnown RBP6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 RUSC1Q9BVN2 902 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 PBX4Q9BYU1 374 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 ADAM19Q9H013 955 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 CARMIL2Q6F5E8 1435 aa6.55□□□□□ -1.36
TSPAN8-205ENST00000550818 MEGF11A6BM72 1044 aa6.54□□□□□ -1.36
TSPAN8-205ENST00000550818 ANKRD33BA6NCL7 494 aa6.54□□□□□ -1.36
TSPAN8-205ENST00000550818 NLRP12P59046 1061 aa6.54□□□□□ -1.36
TSPAN8-205ENST00000550818 ETFBKMTQ8IXQ9 262 aa6.54□□□□□ -1.36
TSPAN8-205ENST00000550818 AGBL5Q8NDL9 886 aa6.54□□□□□ -1.36
TSPAN8-205ENST00000550818 FLCNQ8NFG4 579 aa6.54□□□□□ -1.36
TSPAN8-205ENST00000550818 WNT8BQ93098 351 aa6.54□□□□□ -1.36
TSPAN8-205ENST00000550818 H3BRJ5 948 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 ZBTB39O15060 712 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 CYP26A1O43174 497 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 NDUFB5O43674 189 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 KIF4AO95239 1232 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 PTPRAP18433 802 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 ADMP35318 185 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 PIP4K2BP78356 416 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 NPAS4Q8IUM7 802 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 ZSCAN29Q8IWY8 852 aaPredicted RBP6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 CEP120Q8N960 986 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 METTL22Q9BUU2 404 aaPredicted RBP6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 RBCK1Q9BYM8 510 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 BRPF3Q9ULD4 1205 aa6.53□□□□□ -1.36
TSPAN8-205ENST00000550818 FAM95CA0A1B0GW59 222 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms