RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 C19orf57Q0VDD7 668 aa9.52□□□□□ -0.89
LETMD1-226ENST00000550755 DSC3Q14574 896 aa9.52□□□□□ -0.89
LETMD1-226ENST00000550755 WFDC12Q8WWY7 111 aa9.52□□□□□ -0.89
LETMD1-226ENST00000550755 METTL12A8MUP2 240 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 IREB2P48200 963 aaKnown RBP9.51□□□□□ -0.89
LETMD1-226ENST00000550755 ATP2B2Q01814 1243 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 DOC2BQ14184 412 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 DUOXA2Q1HG44 320 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 TMEM130Q8N3G9 435 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 KLHDC7BQ96G42 594 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 TCF12Q99081 682 aa9.51□□□□□ -0.89
LETMD1-226ENST00000550755 ENOX2Q16206 610 aaKnown RBP9.5□□□□□ -0.89
LETMD1-226ENST00000550755 FOXD4L6Q3SYB3 417 aaPredicted RBP9.5□□□□□ -0.89
LETMD1-226ENST00000550755 FOXD4L3Q6VB84 417 aaPredicted RBP9.5□□□□□ -0.89
LETMD1-226ENST00000550755 EPS8L3Q8TE67 593 aaKnown RBP9.5□□□□□ -0.89
LETMD1-226ENST00000550755 CLEC4MQ9H2X3 399 aaPredicted RBP9.5□□□□□ -0.89
LETMD1-226ENST00000550755 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
LETMD1-226ENST00000550755 SOX1O00570 391 aaPredicted RBP9.49□□□□□ -0.89
LETMD1-226ENST00000550755 GRIA4P48058 902 aa9.49□□□□□ -0.89
LETMD1-226ENST00000550755 SPRED3Q2MJR0 410 aa9.49□□□□□ -0.89
LETMD1-226ENST00000550755 ACAD11Q709F0 780 aa9.49□□□□□ -0.89
LETMD1-226ENST00000550755 DDX54Q8TDD1 881 aaKnown RBP9.49□□□□□ -0.89
LETMD1-226ENST00000550755 ESRRAP11474 423 aaPredicted RBP9.48□□□□□ -0.89
LETMD1-226ENST00000550755 NOS3P29474 1203 aa9.48□□□□□ -0.89
LETMD1-226ENST00000550755 NLRP12P59046 1061 aa9.48□□□□□ -0.89
LETMD1-226ENST00000550755 PCDH1Q08174 1060 aa9.48□□□□□ -0.89
LETMD1-226ENST00000550755 SOX17Q9H6I2 414 aaPredicted RBP9.48□□□□□ -0.89
LETMD1-226ENST00000550755 KCNK4Q9NYG8 393 aa9.48□□□□□ -0.89
LETMD1-226ENST00000550755 FURINP09958 794 aa9.47□□□□□ -0.89
LETMD1-226ENST00000550755 GLB1P16278 677 aa9.47□□□□□ -0.89
LETMD1-226ENST00000550755 FMR1Q06787 632 aaKnown RBP eCLIP9.47□□□□□ -0.89
LETMD1-226ENST00000550755 ALG1LQ6GMV1 187 aa9.47□□□□□ -0.89
LETMD1-226ENST00000550755 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.47□□□□□ -0.89
LETMD1-226ENST00000550755 HOMEZQ8IX15 550 aa9.47□□□□□ -0.89
LETMD1-226ENST00000550755 FBF1Q8TES7 1133 aa9.47□□□□□ -0.89
LETMD1-226ENST00000550755 ZFYVE1Q9HBF4 777 aa9.47□□□□□ -0.89
LETMD1-226ENST00000550755 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
LETMD1-226ENST00000550755 DDX3YO15523 660 aaKnown RBP9.46□□□□□ -0.9
LETMD1-226ENST00000550755 ALX3O95076 343 aa9.46□□□□□ -0.9
LETMD1-226ENST00000550755 GSTM4Q03013 218 aa9.46□□□□□ -0.9
LETMD1-226ENST00000550755 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.46□□□□□ -0.9
LETMD1-226ENST00000550755 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.9
LETMD1-226ENST00000550755 TP53INP1Q96A56 240 aa9.46□□□□□ -0.9
LETMD1-226ENST00000550755 CEP41Q9BYV8 373 aa9.46□□□□□ -0.9
LETMD1-226ENST00000550755 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
LETMD1-226ENST00000550755 ADAM11O75078 769 aa9.45□□□□□ -0.9
LETMD1-226ENST00000550755 ITPKAP23677 461 aa9.45□□□□□ -0.9
LETMD1-226ENST00000550755 PTPN12Q05209 780 aaKnown RBP9.45□□□□□ -0.9
LETMD1-226ENST00000550755 GRM2Q14416 872 aa9.45□□□□□ -0.9
LETMD1-226ENST00000550755 DTHD1Q6ZMT9 781 aa9.45□□□□□ -0.9
LETMD1-226ENST00000550755 AGGF1Q8N302 714 aaeCLIP9.45□□□□□ -0.9
LETMD1-226ENST00000550755 UBASH3BQ8TF42 649 aa9.45□□□□□ -0.9
LETMD1-226ENST00000550755 FOXD4L4Q8WXT5 416 aaPredicted RBP9.45□□□□□ -0.9
LETMD1-226ENST00000550755 USP26Q9BXU7 913 aa9.45□□□□□ -0.9
LETMD1-226ENST00000550755 GZF1Q9H116 711 aaPredicted RBP9.45□□□□□ -0.9
LETMD1-226ENST00000550755 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
LETMD1-226ENST00000550755 WISP1O95388 367 aa9.44□□□□□ -0.9
LETMD1-226ENST00000550755 HGSNATQ68CP4 663 aa9.44□□□□□ -0.9
LETMD1-226ENST00000550755 PI16Q6UXB8 463 aa9.44□□□□□ -0.9
LETMD1-226ENST00000550755 BCO2Q9BYV7 579 aa9.44□□□□□ -0.9
LETMD1-226ENST00000550755 ABCB6Q9NP58 842 aa9.44□□□□□ -0.9
LETMD1-226ENST00000550755 TM4SF5O14894 197 aa9.43□□□□□ -0.9
LETMD1-226ENST00000550755 XRCC5P13010 732 aaKnown RBP9.43□□□□□ -0.9
LETMD1-226ENST00000550755 FCGRTP55899 365 aa9.43□□□□□ -0.9
LETMD1-226ENST00000550755 FGD1P98174 961 aa9.43□□□□□ -0.9
LETMD1-226ENST00000550755 KIAA1211Q6ZU35 1233 aa9.43□□□□□ -0.9
LETMD1-226ENST00000550755 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
LETMD1-226ENST00000550755 RNF208Q9H0X6 261 aa9.43□□□□□ -0.9
LETMD1-226ENST00000550755 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
LETMD1-226ENST00000550755 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
LETMD1-226ENST00000550755 ANKRD33BA6NCL7 494 aa9.42□□□□□ -0.9
LETMD1-226ENST00000550755 CYP11A1P05108 521 aa9.42□□□□□ -0.9
LETMD1-226ENST00000550755 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
LETMD1-226ENST00000550755 ZNF423Q2M1K9 1284 aa9.42□□□□□ -0.9
LETMD1-226ENST00000550755 RPS26P11Q5JNZ5 115 aaPredicted RBP9.42□□□□□ -0.9
LETMD1-226ENST00000550755 MEGF10Q96KG7 1140 aa9.42□□□□□ -0.9
LETMD1-226ENST00000550755 GIPC1O14908 333 aa9.41□□□□□ -0.9
LETMD1-226ENST00000550755 SART1O43290 800 aaKnown RBP9.41□□□□□ -0.9
LETMD1-226ENST00000550755 B3GALT4O96024 378 aa9.41□□□□□ -0.9
LETMD1-226ENST00000550755 P4HBP07237 508 aaKnown RBP9.41□□□□□ -0.9
LETMD1-226ENST00000550755 CCDC27Q2M243 656 aa9.41□□□□□ -0.9
LETMD1-226ENST00000550755 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
LETMD1-226ENST00000550755 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
LETMD1-226ENST00000550755 DZIP1LQ8IYY4 767 aaKnown RBP9.41□□□□□ -0.9
LETMD1-226ENST00000550755 SSBP4Q9BWG4 385 aaPredicted RBP9.41□□□□□ -0.9
LETMD1-226ENST00000550755 SRCIN1Q9C0H9 1055 aa9.41□□□□□ -0.9
LETMD1-226ENST00000550755 SEMA6BQ9H3T3 888 aa9.41□□□□□ -0.9
LETMD1-226ENST00000550755 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
LETMD1-226ENST00000550755 COL19A1Q14993 1142 aa9.4□□□□□ -0.9
LETMD1-226ENST00000550755 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
LETMD1-226ENST00000550755 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
LETMD1-226ENST00000550755 ANKRD34AQ69YU3 496 aa9.4□□□□□ -0.9
LETMD1-226ENST00000550755 FDX2Q6P4F2 183 aa9.4□□□□□ -0.9
LETMD1-226ENST00000550755 Q6ZS46 218 aa9.4□□□□□ -0.9
LETMD1-226ENST00000550755 GLIS3Q8NEA6 775 aa9.4□□□□□ -0.9
LETMD1-226ENST00000550755 LOC100289279A0A1B0GTE1 492 aa9.39□□□□□ -0.91
LETMD1-226ENST00000550755 ADAM23O75077 832 aa9.39□□□□□ -0.91
LETMD1-226ENST00000550755 H2AFB1P0C5Y9 115 aa9.39□□□□□ -0.91
LETMD1-226ENST00000550755 H2AFB2P0C5Z0 115 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms