RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 MCUR1Q96AQ8 359 aa9.89□□□□□ -0.83
PPFIA2-220ENST00000550584 EFCAB5A4FU69 1503 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 TRIM21P19474 475 aaKnown RBP9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 MAP3K7CLP57077 242 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 ZFYVE27Q5T4F4 411 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 GDPD2Q9HCC8 539 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 TMEM232C9JQI7 657 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 PSMD2Q13200 908 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 PPP1R21Q6ZMI0 780 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 TRAK1Q9UPV9 953 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 AKAP2Q9Y2D5 859 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 N4BP3O15049 544 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 VSIG1Q86XK7 387 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 KIF1BPQ96EK5 621 aa9.88□□□□□ -0.83
PPFIA2-220ENST00000550584 ATP5HO75947 161 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 SYKP43405 635 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 STK3Q13188 491 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 ZNF280CQ8ND82 737 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 KLHDC4Q8TBB5 520 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 PIK3R5Q8WYR1 880 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 PARP2Q9UGN5 583 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 SFSWAPQ12872 951 aaKnown RBP9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 NBPF14Q5TI25 921 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 PRM3Q9NNZ6 103 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 ATP2A1O14983 1001 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 FAM160A1Q05DH4 1040 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 PARP9Q8IXQ6 854 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 TDRD7Q8NHU6 1098 aaKnown RBP9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 KLHL14Q9P2G3 628 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 HDAC9Q9UKV0 1011 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 ZMYM4Q5VZL5 1548 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 PRC1O43663 620 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 COG7P83436 770 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 DEUP1Q05D60 604 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 NEK1Q96PY6 1258 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 SCINQ9Y6U3 715 aa9.87□□□□□ -0.83
PPFIA2-220ENST00000550584 FERP16591 822 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 CORO7P57737 925 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 AMPD3Q01432 767 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 NUP58Q9BVL2 599 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 TXLNGQ9NUQ3 528 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 ADAM21Q9UKJ8 722 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 ELL2O00472 640 aaPredicted RBP9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 ACTN4O43707 911 aaKnown RBP9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 BRD1O95696 1058 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 RUFY3Q7L099 469 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 FERMT3Q86UX7 667 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 GAS2L3Q86XJ1 694 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 PIP4K2CQ8TBX8 421 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 TSC1Q92574 1164 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 COG3Q96JB2 828 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 FAM169AQ9Y6X4 670 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 STXBP3O00186 592 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 CTIFO43310 598 aaKnown RBP9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 NMIQ13287 307 aaPredicted RBP9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 SPTY2D1Q68D10 685 aaPredicted RBP9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 TMEM63CQ9P1W3 806 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 FBXO38Q6PIJ6 1188 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 CLEC17AQ6ZS10 378 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 CPLX3Q8WVH0 158 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 ANGPTL2Q9UKU9 493 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 RALGAPBQ86X10 1494 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 ARAP1Q96P48 1450 aa9.86□□□□□ -0.83
PPFIA2-220ENST00000550584 ZRANB2O95218 330 aaKnown RBP eCLIP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 POLE2P56282 527 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 SLC8A3P57103 927 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 ISM2Q6H9L7 571 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 UTP6Q9NYH9 597 aaKnown RBP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 AKR1B10O60218 316 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 BRAPQ7Z569 592 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 CDC23Q9UJX2 597 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 SUN1O94901 812 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 ZNF513Q8N8E2 541 aaPredicted RBP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 USP26Q9BXU7 913 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 IKBKGQ9Y6K9 419 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 NCAPD3P42695 1498 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 ATP2A2P16615 1042 aaKnown RBP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 TRIM68Q6AZZ1 485 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 GRAMD4Q6IC98 578 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 CCDC80Q76M96 950 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 ARMCX6Q7L4S7 300 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 ZNF653Q96CK0 615 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 STAMBPL1Q96FJ0 436 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 SEPT11Q9NVA2 429 aaKnown RBP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 OPHN1O60890 802 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 RPSAP08865 295 aaKnown RBP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 MATR3P43243 847 aaKnown RBP eCLIP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 NLRP12P59046 1061 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 MAML3Q96JK9 1138 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 KLC4Q9NSK0 619 aa9.85□□□□□ -0.83
PPFIA2-220ENST00000550584 SLFN14P0C7P3 912 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 ICA1Q05084 483 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 KARSQ15046 597 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 HOMER2Q9NSB8 354 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 TSPYL4Q9UJ04 414 aa9.84□□□□□ -0.83
PPFIA2-220ENST00000550584 TBC1D2BQ9UPU7 963 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms