RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 CCDC148Q8NFR7 591 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 XAGE2Q96GT9 111 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 LIMCH1Q9UPQ0 1083 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 UQCRHLA0A096LP55 91 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 SMC2O95347 1197 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 UQCRHP07919 91 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 DESP17661 470 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 KLHDC4Q8TBB5 520 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 ZNHIT6Q9NWK9 470 aaKnown RBP14.06□□□□□ -0.16
NR4A1-215ENST00000550557 TTC41PQ6P2S7 1318 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 CTSWP56202 376 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 HEATR3Q7Z4Q2 680 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 TEKT1Q969V4 418 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 CA8P35219 290 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
NR4A1-215ENST00000550557 ZNF592Q92610 1267 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 ARGLU1Q9NWB6 273 aaPredicted RBP14.06□□□□□ -0.16
NR4A1-215ENST00000550557 SMARCE1Q969G3 411 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 ALKQ9UM73 1620 aa14.06□□□□□ -0.16
NR4A1-215ENST00000550557 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
NR4A1-215ENST00000550557 NRXN1Q9ULB1 1477 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 PSDA5PKW4 1024 aaPredicted RBP14.05□□□□□ -0.16
NR4A1-215ENST00000550557 SPDYE3A6NKU9 549 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 ZYXQ15942 572 aaKnown RBP14.05□□□□□ -0.16
NR4A1-215ENST00000550557 RTN1Q16799 776 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 PIGBQ92521 554 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 IRX3P78415 501 aaPredicted RBP14.05□□□□□ -0.16
NR4A1-215ENST00000550557 BRDTQ58F21 947 aaPredicted RBP14.05□□□□□ -0.16
NR4A1-215ENST00000550557 KIAA0825Q8IV33 1275 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 TNMDQ9H2S6 317 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 TULP4Q9NRJ4 1543 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 DIP2CQ9Y2E4 1556 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 PTPRMP28827 1452 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 NAPAP54920 295 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 TTLL5Q6EMB2 1281 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 CALML4Q96GE6 196 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 SPON1Q9HCB6 807 aa14.05□□□□□ -0.16
NR4A1-215ENST00000550557 BRF1Q92994 677 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 SUCLG2Q96I99 432 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
NR4A1-215ENST00000550557 ZBTB38Q8NAP3 1195 aaPredicted RBP14.04□□□□□ -0.16
NR4A1-215ENST00000550557 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 NOD1Q9Y239 953 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 KIF22Q14807 665 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 VWDEQ8N2E2 1590 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 MED14O60244 1454 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 ERMNQ8TAM6 284 aa14.04□□□□□ -0.16
NR4A1-215ENST00000550557 DEPDC5O75140 1603 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 KIF20AO95235 890 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 SERPINC1P01008 464 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 UBA7P41226 1012 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 TNNI3KQ59H18 835 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 ZNF771Q7L3S4 317 aaPredicted RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 TMC4Q7Z404 712 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 TTLL6Q8N841 843 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 DBNDD2Q9BQY9 259 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 TRIM5Q9C035 493 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 ACBD3Q9H3P7 528 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 FPGT-TNNI3KV9GXZ4 949 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 NEURL1BA8MQ27 555 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 ANAPC15P60006 121 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 AATFQ9NY61 560 aaKnown RBP eCLIP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 CALM1P0DP23 149 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 CALM2P0DP24 149 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 CALM3P0DP25 149 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 GIGYF2Q6Y7W6 1299 aaKnown RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 DRC1Q96MC2 740 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 SEPT11Q9NVA2 429 aaKnown RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 IGSF1Q8N6C5 1336 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 TNS3Q68CZ2 1445 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 PPFIA3O75145 1194 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 PCCAP05165 728 aaPredicted RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 IDEP14735 1019 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 NMIQ13287 307 aaPredicted RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 PIM2Q9P1W9 311 aa14.03□□□□□ -0.16
NR4A1-215ENST00000550557 RBM8AQ9Y5S9 174 aaKnown RBP14.03□□□□□ -0.16
NR4A1-215ENST00000550557 TXNRD1Q16881 649 aa14.02□□□□□ -0.16
NR4A1-215ENST00000550557 USP40Q9NVE5 1235 aa14.02□□□□□ -0.16
NR4A1-215ENST00000550557 BBOX1O75936 387 aa14.02□□□□□ -0.16
NR4A1-215ENST00000550557 LUC7LQ9NQ29 371 aaKnown RBP14.02□□□□□ -0.16
NR4A1-215ENST00000550557 GPHNQ9NQX3 736 aaPredicted RBP14.02□□□□□ -0.16
NR4A1-215ENST00000550557 RBM27Q9P2N5 1060 aaKnown RBP14.02□□□□□ -0.16
NR4A1-215ENST00000550557 ZNF853P0CG23 659 aa14.02□□□□□ -0.17
NR4A1-215ENST00000550557 CC2D2BQ6DHV5 1058 aa14.02□□□□□ -0.17
NR4A1-215ENST00000550557 C6orf50Q9HD87 102 aa14.02□□□□□ -0.17
NR4A1-215ENST00000550557 NEXMIFQ5QGS0 1516 aa14.02□□□□□ -0.17
NR4A1-215ENST00000550557 OTUD7BQ6GQQ9 843 aa14.02□□□□□ -0.17
NR4A1-215ENST00000550557 LRRC2Q9BYS8 371 aa14.02□□□□□ -0.17
NR4A1-215ENST00000550557 DEF6Q9H4E7 631 aa14.02□□□□□ -0.17
NR4A1-215ENST00000550557 SRP68Q9UHB9 627 aaKnown RBP14.02□□□□□ -0.17
NR4A1-215ENST00000550557 PKNOX2Q96KN3 472 aa14.01□□□□□ -0.17
NR4A1-215ENST00000550557 RPS6KA4O75676 772 aa14.01□□□□□ -0.17
NR4A1-215ENST00000550557 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
NR4A1-215ENST00000550557 STXBP4Q6ZWJ1 553 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms