RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 NBPF10Q6P3W6 841 aaKnown RBP12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 KSR2Q6VAB6 950 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 NBPF15Q8N660 670 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 PTPDC1A2A3K4 754 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 TAF5LO75529 589 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 CYP21A2P08686 494 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 HAND2P61296 217 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 TFCP2Q12800 502 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 RESTQ13127 1097 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 CCAR2Q8N163 923 aaKnown RBP12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 IFNKQ9P0W0 207 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 ZNF397Q8NF99 534 aaPredicted RBP12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 GJB4Q9NTQ9 266 aa12.53□□□□□ -0.4
SMARCC2-208ENST00000550150 GOLIM4O00461 696 aa12.52□□□□□ -0.4
SMARCC2-208ENST00000550150 STK38Q15208 465 aa12.52□□□□□ -0.4
SMARCC2-208ENST00000550150 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.4
SMARCC2-208ENST00000550150 LRRN4CLQ8ND94 238 aa12.52□□□□□ -0.4
SMARCC2-208ENST00000550150 ACSBG1Q96GR2 724 aa12.52□□□□□ -0.4
SMARCC2-208ENST00000550150 ANO10Q9NW15 660 aa12.52□□□□□ -0.4
SMARCC2-208ENST00000550150 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 KCNQ2O43526 872 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 SLU7O95391 586 aaKnown RBP12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 IQCB1Q15051 598 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 HSP90AB3PQ58FF7 597 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 DBNDD2Q9BQY9 259 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 ATG3Q9NT62 314 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 BCL9O00512 1426 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 A1BGP04217 495 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
SMARCC2-208ENST00000550150 SFPQP23246 707 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 DPCR1Q3MIW9 517 aa12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 KAZALD1Q96I82 304 aa12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 XPO4Q9C0E2 1151 aaKnown RBP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 NAT10Q9H0A0 1025 aaKnown RBP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 GPHNQ9NQX3 736 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 DBNLQ9UJU6 430 aaKnown RBP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-208ENST00000550150 KRT32Q14532 448 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 ARHGAP29Q52LW3 1261 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 ZSCAN16Q9H4T2 348 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 NRDCO43847 1150 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 URI1O94763 535 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 MARCKSP29966 332 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 TTC5Q8N0Z6 440 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 LINS1Q8NG48 757 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 EPC1Q9H2F5 836 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 EXOC5O00471 708 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 SLFN14P0C7P3 912 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 CCZ1BP86790 482 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 CCZ1P86791 482 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 DHX40Q8IX18 779 aaKnown RBP12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 MNS1Q8NEH6 495 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 HMG20BQ9P0W2 317 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 HDAC5Q9UQL6 1122 aa12.5□□□□□ -0.41
SMARCC2-208ENST00000550150 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 TERF2Q15554 542 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 ZNF396Q96N95 335 aaPredicted RBP12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 DDX21Q9NR30 783 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 SNRKQ9NRH2 765 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 THSD7AQ9UPZ6 1657 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 NDUFA8P51970 172 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 TIMM10P62072 90 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 FAM160A1Q05DH4 1040 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 DDB1Q16531 1140 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 PDILTQ8N807 584 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 TMOD3Q9NYL9 352 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 SERPINC1P01008 464 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 IGKV5-2P06315 115 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 ERO1AQ96HE7 468 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 MRFAP1L1Q96HT8 127 aa12.49□□□□□ -0.41
SMARCC2-208ENST00000550150 USP42Q9H9J4 1324 aaKnown RBP12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 CPLX1O14810 134 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 KCNQ4P56696 695 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 WASHC4Q2M389 1173 aa12.48□□□□□ -0.41
SMARCC2-208ENST00000550150 MCMDC2Q4G0Z9 681 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms