RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 RNF208Q9H0X6 261 aa7.35□□□□□ -1.23
SNRPF-202ENST00000549580 BSDC1Q9NW68 430 aaPredicted RBP7.35□□□□□ -1.23
SNRPF-202ENST00000549580 TMEM88BA6NKF7 163 aa7.34□□□□□ -1.23
SNRPF-202ENST00000549580 SCNN1AP37088 669 aa7.34□□□□□ -1.23
SNRPF-202ENST00000549580 SGO2Q562F6 1265 aa7.34□□□□□ -1.23
SNRPF-202ENST00000549580 NPM2Q86SE8 214 aaKnown RBP7.34□□□□□ -1.23
SNRPF-202ENST00000549580 FBXL6Q8N531 539 aa7.34□□□□□ -1.23
SNRPF-202ENST00000549580 AGBL5Q8NDL9 886 aa7.34□□□□□ -1.23
SNRPF-202ENST00000549580 SPACA7Q96KW9 195 aa7.34□□□□□ -1.23
SNRPF-202ENST00000549580 POP1Q99575 1024 aaKnown RBP7.34□□□□□ -1.23
SNRPF-202ENST00000549580 GZF1Q9H116 711 aaPredicted RBP7.34□□□□□ -1.23
SNRPF-202ENST00000549580 NLRP12P59046 1061 aa7.33□□□□□ -1.24
SNRPF-202ENST00000549580 ELOAQ14241 798 aaKnown RBP7.33□□□□□ -1.24
SNRPF-202ENST00000549580 HGSNATQ68CP4 663 aa7.33□□□□□ -1.24
SNRPF-202ENST00000549580 FLCNQ8NFG4 579 aa7.33□□□□□ -1.24
SNRPF-202ENST00000549580 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
SNRPF-202ENST00000549580 PBX4Q9BYU1 374 aa7.33□□□□□ -1.24
SNRPF-202ENST00000549580 SEC31BQ9NQW1 1179 aa7.33□□□□□ -1.24
SNRPF-202ENST00000549580 ACPPP15309 386 aa7.32□□□□□ -1.24
SNRPF-202ENST00000549580 FAM200AQ8TCP9 573 aa7.32□□□□□ -1.24
SNRPF-202ENST00000549580 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.32□□□□□ -1.24
SNRPF-202ENST00000549580 CARNS1A5YM72 827 aa7.31□□□□□ -1.24
SNRPF-202ENST00000549580 TNFRSF10BO14763 440 aa7.31□□□□□ -1.24
SNRPF-202ENST00000549580 PRMT3O60678 531 aa7.31□□□□□ -1.24
SNRPF-202ENST00000549580 KRTAP19-4Q3LI73 84 aa7.31□□□□□ -1.24
SNRPF-202ENST00000549580 TMCO4Q5TGY1 634 aa7.31□□□□□ -1.24
SNRPF-202ENST00000549580 TTC39BQ5VTQ0 682 aaPredicted RBP7.31□□□□□ -1.24
SNRPF-202ENST00000549580 FAM117BQ6P1L5 589 aa7.31□□□□□ -1.24
SNRPF-202ENST00000549580 FDX2Q6P4F2 183 aa7.31□□□□□ -1.24
SNRPF-202ENST00000549580 METTL22Q9BUU2 404 aaPredicted RBP7.31□□□□□ -1.24
SNRPF-202ENST00000549580 GAS2O43903 313 aaKnown RBP7.3□□□□□ -1.24
SNRPF-202ENST00000549580 TRPA1O75762 1119 aa7.3□□□□□ -1.24
SNRPF-202ENST00000549580 KIF4AO95239 1232 aa7.3□□□□□ -1.24
SNRPF-202ENST00000549580 BRD2P25440 801 aaKnown RBP7.3□□□□□ -1.24
SNRPF-202ENST00000549580 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
SNRPF-202ENST00000549580 NAA30Q147X3 362 aaPredicted RBP7.3□□□□□ -1.24
SNRPF-202ENST00000549580 CEP120Q8N960 986 aa7.3□□□□□ -1.24
SNRPF-202ENST00000549580 GPR152Q8TDT2 470 aa7.3□□□□□ -1.24
SNRPF-202ENST00000549580 PIK3R5Q8WYR1 880 aa7.3□□□□□ -1.24
SNRPF-202ENST00000549580 RUSC1Q9BVN2 902 aa7.3□□□□□ -1.24
SNRPF-202ENST00000549580 MEGF11A6BM72 1044 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 ZBTB39O15060 712 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 CYP26A1O43174 497 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 FARP2O94887 1054 aaPredicted RBP7.29□□□□□ -1.24
SNRPF-202ENST00000549580 ZNF865P0CJ78 1059 aaPredicted RBP7.29□□□□□ -1.24
SNRPF-202ENST00000549580 C16orf46Q6P387 395 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 NCAPG2Q86XI2 1143 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 WFDC3Q8IUB2 231 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 RGS22Q8NE09 1264 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 SLC7A3Q8WY07 619 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 WNT8BQ93098 351 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 MKNK1Q9BUB5 465 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 KANSL3Q9P2N6 904 aa7.29□□□□□ -1.24
SNRPF-202ENST00000549580 PTPRAP18433 802 aa7.28□□□□□ -1.24
SNRPF-202ENST00000549580 CILP2Q8IUL8 1156 aa7.28□□□□□ -1.24
SNRPF-202ENST00000549580 HHIPQ96QV1 700 aa7.28□□□□□ -1.24
SNRPF-202ENST00000549580 ADAM19Q9H013 955 aa7.28□□□□□ -1.24
SNRPF-202ENST00000549580 ZMIZ1Q9ULJ6 1067 aa7.28□□□□□ -1.24
SNRPF-202ENST00000549580 H3BRJ5 948 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 RXRBP28702 533 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 ADMP35318 185 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 ZAP70P43403 619 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 PIP4K2BP78356 416 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 OCLNQ16625 522 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 ABI2Q9NYB9 513 aaPredicted RBP7.27□□□□□ -1.25
SNRPF-202ENST00000549580 TMEM63CQ9P1W3 806 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 CNTN3Q9P232 1028 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 NCANO14594 1321 aa7.27□□□□□ -1.25
SNRPF-202ENST00000549580 TIAF1O95411 115 aa7.26□□□□□ -1.25
SNRPF-202ENST00000549580 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
SNRPF-202ENST00000549580 PKN1Q16512 942 aa7.26□□□□□ -1.25
SNRPF-202ENST00000549580 OSGEPQ9NPF4 335 aa7.26□□□□□ -1.25
SNRPF-202ENST00000549580 NOVA2Q9UNW9 492 aaKnown RBP7.26□□□□□ -1.25
SNRPF-202ENST00000549580 NFKBIEO00221 500 aa7.25□□□□□ -1.25
SNRPF-202ENST00000549580 BIN1O00499 593 aa7.25□□□□□ -1.25
SNRPF-202ENST00000549580 TMEM164Q5U3C3 297 aa7.25□□□□□ -1.25
SNRPF-202ENST00000549580 ZAR1Q86SH2 424 aa7.25□□□□□ -1.25
SNRPF-202ENST00000549580 STK32AQ8WU08 396 aa7.25□□□□□ -1.25
SNRPF-202ENST00000549580 GATA6Q92908 595 aa7.25□□□□□ -1.25
SNRPF-202ENST00000549580 GNEQ9Y223 722 aaKnown RBP7.25□□□□□ -1.25
SNRPF-202ENST00000549580 FAM95CA0A1B0GW59 222 aa7.24□□□□□ -1.25
SNRPF-202ENST00000549580 DLGAP3O95886 979 aa7.24□□□□□ -1.25
SNRPF-202ENST00000549580 DRD2P14416 443 aa7.24□□□□□ -1.25
SNRPF-202ENST00000549580 NFKBIBQ15653 356 aa7.24□□□□□ -1.25
SNRPF-202ENST00000549580 ZNF792Q3KQV3 632 aa7.24□□□□□ -1.25
SNRPF-202ENST00000549580 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
SNRPF-202ENST00000549580 C12orf50Q8NA57 414 aaPredicted RBP7.24□□□□□ -1.25
SNRPF-202ENST00000549580 TMPRSS13Q9BYE2 586 aa7.24□□□□□ -1.25
SNRPF-202ENST00000549580 ZC3H7BQ9UGR2 993 aaKnown RBP7.24□□□□□ -1.25
SNRPF-202ENST00000549580 PRRG2O14669 202 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 PAOXQ6QHF9 649 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 KSR1Q8IVT5 923 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 ELP3Q9H9T3 547 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 SUGCTQ9HAC7 445 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 PRKAG2Q9UGJ0 569 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 MTMR7Q9Y216 660 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 FNDC3AQ9Y2H6 1198 aaKnown RBP7.23□□□□□ -1.25
SNRPF-202ENST00000549580 IVNS1ABPQ9Y6Y0 642 aa7.23□□□□□ -1.25
SNRPF-202ENST00000549580 FAM170BA6NMN3 283 aa7.22□□□□□ -1.25
SNRPF-202ENST00000549580 FAM177BA6PVY3 158 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms