RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 CCDC136Q96JN2 1154 aa15.19■□□□□ 0.02
SYT1-207ENST00000549559 DBNDD2Q9BQY9 259 aa15.19■□□□□ 0.02
SYT1-207ENST00000549559 YDJCA8MPS7 323 aa15.18■□□□□ 0.02
SYT1-207ENST00000549559 CCDC102BQ68D86 513 aa15.18■□□□□ 0.02
SYT1-207ENST00000549559 TDRD7Q8NHU6 1098 aaKnown RBP15.18■□□□□ 0.02
SYT1-207ENST00000549559 CCDC8Q9H0W5 538 aaPredicted RBP15.18■□□□□ 0.02
SYT1-207ENST00000549559 PPP4R2Q9NY27 417 aa15.18■□□□□ 0.02
SYT1-207ENST00000549559 DBNLQ9UJU6 430 aaKnown RBP15.18■□□□□ 0.02
SYT1-207ENST00000549559 SEMA3EO15041 775 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 FRAT2O75474 233 aaPredicted RBP15.17■□□□□ 0.02
SYT1-207ENST00000549559 UQCRFS1P1P0C7P4 283 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 PHKA1P46020 1223 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 TNIP1Q15025 636 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 CCDC158Q5M9N0 1113 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
SYT1-207ENST00000549559 BCL11AQ9H165 835 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 TLR7Q9NYK1 1049 aaKnown RBP15.17■□□□□ 0.02
SYT1-207ENST00000549559 PSME4Q14997 1843 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 ZNF541Q9H0D2 1346 aa15.17■□□□□ 0.02
SYT1-207ENST00000549559 SCN9AQ15858 1988 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 MYH13Q9UKX3 1938 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 NUCB1Q02818 461 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 CIAPIN1Q6FI81 312 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 B4GALNT3Q6L9W6 998 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 KDM2BQ8NHM5 1336 aa15.16■□□□□ 0.02
SYT1-207ENST00000549559 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 RAD17O75943 681 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 ARID4AP29374 1257 aaPredicted RBP15.15■□□□□ 0.02
SYT1-207ENST00000549559 CXCL9Q07325 125 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 STRIP1Q5VSL9 837 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 DPY19L2Q6NUT2 758 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 CHD1LQ86WJ1 897 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 GPATCH3Q96I76 525 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 ZNF512BQ96KM6 892 aaPredicted RBP15.15■□□□□ 0.02
SYT1-207ENST00000549559 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 IQSEC3Q9UPP2 1182 aaPredicted RBP15.15■□□□□ 0.02
SYT1-207ENST00000549559 PDS5AQ29RF7 1337 aaKnown RBP15.15■□□□□ 0.02
SYT1-207ENST00000549559 FAM205AQ6ZU69 1335 aa15.15■□□□□ 0.02
SYT1-207ENST00000549559 GTF2IP78347 998 aa15.14■□□□□ 0.01
SYT1-207ENST00000549559 TTLL5Q6EMB2 1281 aa15.14■□□□□ 0.01
SYT1-207ENST00000549559 GPC2Q8N158 579 aa15.14■□□□□ 0.01
SYT1-207ENST00000549559 FBXW7Q969H0 707 aa15.14■□□□□ 0.01
SYT1-207ENST00000549559 LNPKQ9C0E8 428 aa15.14■□□□□ 0.01
SYT1-207ENST00000549559 GLTPD2A6NH11 291 aa15.13■□□□□ 0.01
SYT1-207ENST00000549559 PSMD14O00487 310 aa15.13■□□□□ 0.01
SYT1-207ENST00000549559 VIL1P09327 827 aaKnown RBP15.13■□□□□ 0.01
SYT1-207ENST00000549559 FKBP1AP62942 108 aaKnown RBP15.13■□□□□ 0.01
SYT1-207ENST00000549559 CHAF1AQ13111 956 aaPredicted RBP15.13■□□□□ 0.01
SYT1-207ENST00000549559 RASGRF1Q13972 1273 aa15.13■□□□□ 0.01
SYT1-207ENST00000549559 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
SYT1-207ENST00000549559 KCNQ5Q9NR82 932 aa15.13■□□□□ 0.01
SYT1-207ENST00000549559 GJA3Q9Y6H8 435 aa15.13■□□□□ 0.01
SYT1-207ENST00000549559 COL1A1P02452 1464 aaPredicted RBP15.13■□□□□ 0.01
SYT1-207ENST00000549559 MYO3BQ8WXR4 1341 aa15.13■□□□□ 0.01
SYT1-207ENST00000549559 ZNF646O15015 1829 aaPredicted RBP15.13■□□□□ 0.01
SYT1-207ENST00000549559 RPS12P25398 132 aaKnown RBP15.12■□□□□ 0.01
SYT1-207ENST00000549559 DACT2Q5SW24 774 aa15.12■□□□□ 0.01
SYT1-207ENST00000549559 RSBN1LQ6PCB5 846 aaPredicted RBP15.12■□□□□ 0.01
SYT1-207ENST00000549559 WDR66Q8TBY9 1149 aa15.12■□□□□ 0.01
SYT1-207ENST00000549559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.12■□□□□ 0.01
SYT1-207ENST00000549559 ECHDC1Q9NTX5 307 aa15.12■□□□□ 0.01
SYT1-207ENST00000549559 TTC41PQ6P2S7 1318 aa15.12■□□□□ 0.01
SYT1-207ENST00000549559 DDNO94850 711 aaPredicted RBP15.11■□□□□ 0.01
SYT1-207ENST00000549559 MX1P20591 662 aa15.11■□□□□ 0.01
SYT1-207ENST00000549559 MCAMP43121 646 aa15.11■□□□□ 0.01
SYT1-207ENST00000549559 C16orf71Q8IYS4 520 aaPredicted RBP15.11■□□□□ 0.01
SYT1-207ENST00000549559 SPATA5Q8NB90 893 aa15.11■□□□□ 0.01
SYT1-207ENST00000549559 AGBL3Q8NEM8 1001 aa15.11■□□□□ 0.01
SYT1-207ENST00000549559 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
SYT1-207ENST00000549559 JAG2Q9Y219 1238 aa15.11■□□□□ 0.01
SYT1-207ENST00000549559 ERC2O15083 957 aa15.1■□□□□ 0.01
SYT1-207ENST00000549559 ATP5JP18859 108 aa15.1■□□□□ 0.01
SYT1-207ENST00000549559 SCARF1Q14162 830 aa15.1■□□□□ 0.01
SYT1-207ENST00000549559 MFSD14BQ5SR56 506 aa15.1■□□□□ 0.01
SYT1-207ENST00000549559 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
SYT1-207ENST00000549559 OTUD7AQ8TE49 926 aaPredicted RBP15.1■□□□□ 0.01
SYT1-207ENST00000549559 L3MBTL3Q96JM7 780 aaPredicted RBP15.1■□□□□ 0.01
SYT1-207ENST00000549559 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
SYT1-207ENST00000549559 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
SYT1-207ENST00000549559 AKAP11Q9UKA4 1901 aa15.09■□□□□ 0.01
SYT1-207ENST00000549559 GMPSP49915 693 aaPredicted RBP15.09■□□□□ 0.01
SYT1-207ENST00000549559 DPF2Q92785 391 aa15.09■□□□□ 0.01
SYT1-207ENST00000549559 STAP2Q9UGK3 403 aa15.09■□□□□ 0.01
SYT1-207ENST00000549559 SUGT1Q9Y2Z0 365 aa15.09■□□□□ 0.01
SYT1-207ENST00000549559 WDR90Q96KV7 1748 aa15.09■□□□□ 0.01
SYT1-207ENST00000549559 GLRX3O76003 335 aaKnown RBP15.08■□□□□ 0
SYT1-207ENST00000549559 YY1P25490 414 aa15.08■□□□□ 0
SYT1-207ENST00000549559 LMOD1P29536 600 aaPredicted RBP15.08■□□□□ 0
SYT1-207ENST00000549559 MMP14P50281 582 aa15.08■□□□□ 0
SYT1-207ENST00000549559 PDE1AP54750 535 aa15.08■□□□□ 0
SYT1-207ENST00000549559 PI16Q6UXB8 463 aa15.08■□□□□ 0
SYT1-207ENST00000549559 CERS5Q8N5B7 392 aa15.08■□□□□ 0
SYT1-207ENST00000549559 GMLQ99445 158 aa15.08■□□□□ 0
SYT1-207ENST00000549559 MXD3Q9BW11 206 aa15.08■□□□□ 0
SYT1-207ENST00000549559 SNRKQ9NRH2 765 aa15.08■□□□□ 0
SYT1-207ENST00000549559 AOX1Q06278 1338 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms