RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 IRS2Q9Y4H2 1338 aa11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 EIF5BO60841 1220 aaKnown RBP11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 TNIP1Q15025 636 aa11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 AOC3Q16853 763 aa11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 TDRD7Q8NHU6 1098 aaKnown RBP11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 CD209Q9NNX6 404 aa11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 ZNF277Q9NRM2 450 aaPredicted RBP11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 AK9Q5TCS8 1911 aa11.89□□□□□ -0.51
SMARCD1-206ENST00000549274 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 ECE2O60344 883 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 YBX3P16989 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 PHKA1P46020 1223 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 GYG1P46976 350 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 EIF6P56537 245 aaKnown RBP11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 STRIP1Q5VSL9 837 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 OLFM4Q6UX06 510 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 CNTROBQ8N137 903 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 AKAP11Q9UKA4 1901 aa11.88□□□□□ -0.51
SMARCD1-206ENST00000549274 MAST3O60307 1309 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 FAM205AQ6ZU69 1335 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 SALL1Q9NSC2 1324 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 USP17L3A6NCW0 530 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 USP17L4A6NCW7 530 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 ADORA1P30542 326 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 BCAMP50895 628 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 USP17L1Q7RTZ2 530 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 PLEKHM2Q8IWE5 1019 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 SLF2Q8IX21 1173 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 HAUS7Q99871 368 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
SMARCD1-206ENST00000549274 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 MYH7P12883 1935 aa11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 SNAP23O00161 211 aa11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 HIP1O00291 1037 aa11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 RASSF7Q02833 373 aa11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 TTLL5Q6EMB2 1281 aa11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 TLR7Q9NYK1 1049 aaKnown RBP11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 RFX7Q2KHR2 1363 aa11.86□□□□□ -0.51
SMARCD1-206ENST00000549274 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 RPS12P25398 132 aaKnown RBP11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 CIAPIN1Q6FI81 312 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 TXNRD3Q86VQ6 643 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 CERS3Q8IU89 383 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 PI4K2BQ8TCG2 481 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 EVI5LQ96CN4 794 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 PAG1Q9NWQ8 432 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 RNF181Q9P0P0 153 aa11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.85□□□□□ -0.51
SMARCD1-206ENST00000549274 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 DOCK2Q92608 1830 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 FZD9O00144 591 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 KLRK1P26718 216 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 PDE4AP27815 886 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 MCAMP43121 646 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 GSTO1P78417 241 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 TTC22Q5TAA0 569 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 ERICH6Q7L0X2 663 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 C16orf71Q8IYS4 520 aaPredicted RBP11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 AGBL3Q8NEM8 1001 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 GPR101Q96P66 508 aaPredicted RBP11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 BOLA2Q9H3K6 86 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 HMG20BQ9P0W2 317 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 HDAC9Q9UKV0 1011 aa11.84□□□□□ -0.51
SMARCD1-206ENST00000549274 TRIM6-TRIM34B2RNG4 842 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 LDHBP07195 334 aaKnown RBP11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 LDHCP07864 332 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 VIL1P09327 827 aaKnown RBP11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 RGS3P49796 1198 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 GTF2IP78347 998 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 C9orf131Q5VYM1 1079 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 KBTBD3Q8NAB2 608 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 FBXW7Q969H0 707 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 DNAJC2Q99543 621 aaKnown RBP11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 LRP2BPQ9P2M1 347 aa11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
SMARCD1-206ENST00000549274 SCN9AQ15858 1988 aa11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 GOLIM4O00461 696 aa11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 ZAP70P43403 619 aa11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 HDLBPQ00341 1268 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 MFSD14BQ5SR56 506 aa11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 RSBN1LQ6PCB5 846 aaPredicted RBP11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 DZIP1Q86YF9 867 aaKnown RBP11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 GPC2Q8N158 579 aa11.82□□□□□ -0.52
SMARCD1-206ENST00000549274 OTUD7AQ8TE49 926 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms