RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 DCAF5Q96JK2 942 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 OGFRQ9NZT2 677 aa16.49■□□□□ 0.23
RAPGEF3-218ENST00000548919 CABP4P57796 275 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 STK38Q15208 465 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 ADALQ6DHV7 355 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 LINC00301Q8NCQ3 95 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 RTEL1Q9NZ71 1219 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 TRPM3Q9HCF6 1732 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 ATL3Q6DD88 541 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 ISM2Q6H9L7 571 aa16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
RAPGEF3-218ENST00000548919 NPHP1O15259 732 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 FOXP2O15409 715 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 SMC2O95347 1197 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 XPO4Q9C0E2 1151 aaKnown RBP16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 KIAA1468Q9P260 1216 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 WASHC4Q2M389 1173 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 C8orf76Q96K31 380 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 IFNKQ9P0W0 207 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 LMTK3Q96Q04 1460 aa16.47■□□□□ 0.23
RAPGEF3-218ENST00000548919 NEDD4P46934 1319 aa16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 CWC25Q9NXE8 425 aaPredicted RBP16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 EYA2O00167 538 aa16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 ADORA1P30542 326 aa16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 ELF2Q15723 593 aa16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 KMT5BQ4FZB7 885 aa16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 TMC6Q7Z403 805 aa16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 DDX41Q9UJV9 622 aaKnown RBP16.46■□□□□ 0.23
RAPGEF3-218ENST00000548919 GOLGA8BA8MQT2 603 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 KIF28PB7ZC32 967 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 A1BGP04217 495 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 ZRSR1Q15695 479 aaKnown RBP16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 KIF18AQ8NI77 898 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 ORC3Q9UBD5 711 aaPredicted RBP16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 ABCC6O95255 1503 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 PRC1O43663 620 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 ARMCX5Q6P1M9 558 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
RAPGEF3-218ENST00000548919 SPTLC2O15270 562 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 E4F1Q66K89 784 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 A0A1W2PQ27 194 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 A0A1W2PQ64 194 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 A0A1W2PQD8 194 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 FGAP02671 866 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 SCARF1Q14162 830 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 FBXO18Q8NFZ0 1043 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 GPR108Q9NPR9 543 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
RAPGEF3-218ENST00000548919 ZNF202O95125 648 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 MARCKSP29966 332 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 MYSM1Q5VVJ2 828 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 AIFM3Q96NN9 605 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 OSBPL5Q9H0X9 879 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 DENND2AQ9ULE3 1009 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 SLC3A2P08195 630 aaKnown RBP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 ANTXR2P58335 489 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 GORABQ5T7V8 394 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 GSDMDP57764 484 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 IMMTQ16891 758 aaKnown RBP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 PROSER2Q86WR7 435 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 KCNG4Q8TDN1 519 aa16.43■□□□□ 0.22
RAPGEF3-218ENST00000548919 EVCP57679 992 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 NKX2-3Q8TAU0 364 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 POLR3EQ9NVU0 708 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 MROH7-TTC4A0A0A0MT08 1334 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 CPLX1O14810 134 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 ATP1A3P13637 1013 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 PFKFB1P16118 471 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 PTPN21Q16825 1174 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 TTC39AQ5SRH9 613 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 SYT10Q6XYQ8 523 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 PPP1R13BQ96KQ4 1090 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 CEP126Q9P2H0 1117 aa16.42■□□□□ 0.22
RAPGEF3-218ENST00000548919 WDHD1O75717 1129 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 RXRAP19793 462 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 NCAPHQ15003 741 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 AXDND1Q5T1B0 1012 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 SYNE3Q6ZMZ3 975 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 ZNF397Q8NF99 534 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 XAGE2Q96GT9 111 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 MORC2Q9Y6X9 1032 aaPredicted RBP16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 C1orf167Q5SNV9 1468 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 GLI3P10071 1580 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 KIF1AQ12756 1690 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 YEATS4O95619 227 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 ANO1Q5XXA6 986 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 ERO1AQ96HE7 468 aa16.41■□□□□ 0.22
RAPGEF3-218ENST00000548919 ZNF330Q9Y3S2 320 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms