RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 IL1R1P14778 569 aa13.69□□□□□ -0.22
SCRN3-212ENST00000548868 GSPT1P15170 499 aaKnown RBP13.69□□□□□ -0.22
SCRN3-212ENST00000548868 MCAMP43121 646 aa13.69□□□□□ -0.22
SCRN3-212ENST00000548868 KIAA2012Q0VF49 1180 aa13.69□□□□□ -0.22
SCRN3-212ENST00000548868 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
SCRN3-212ENST00000548868 CD209Q9NNX6 404 aa13.69□□□□□ -0.22
SCRN3-212ENST00000548868 SBF1O95248 1867 aa13.68□□□□□ -0.22
SCRN3-212ENST00000548868 MYO5AQ9Y4I1 1855 aaKnown RBP13.68□□□□□ -0.22
SCRN3-212ENST00000548868 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
SCRN3-212ENST00000548868 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
SCRN3-212ENST00000548868 SPATA5Q8NB90 893 aa13.68□□□□□ -0.22
SCRN3-212ENST00000548868 TDRD7Q8NHU6 1098 aaKnown RBP13.68□□□□□ -0.22
SCRN3-212ENST00000548868 TRIM6-TRIM34B2RNG4 842 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 G3V3G9 751 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 PPIP5K2O43314 1243 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
SCRN3-212ENST00000548868 RASGRF1Q13972 1273 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 SCARF1Q14162 830 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 TTF1Q15361 905 aaPredicted RBP13.67□□□□□ -0.22
SCRN3-212ENST00000548868 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 TICAM2Q86XR7 235 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 DNAJC2Q99543 621 aaKnown RBP13.67□□□□□ -0.22
SCRN3-212ENST00000548868 PAG1Q9NWQ8 432 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 HMG20BQ9P0W2 317 aa13.67□□□□□ -0.22
SCRN3-212ENST00000548868 NFKBIEO00221 500 aa13.66□□□□□ -0.22
SCRN3-212ENST00000548868 SDSP20132 328 aa13.66□□□□□ -0.22
SCRN3-212ENST00000548868 AOC3Q16853 763 aa13.66□□□□□ -0.22
SCRN3-212ENST00000548868 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
SCRN3-212ENST00000548868 ZNF646O15015 1829 aaPredicted RBP13.66□□□□□ -0.22
SCRN3-212ENST00000548868 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
SCRN3-212ENST00000548868 IARSP41252 1262 aaKnown RBP13.66□□□□□ -0.22
SCRN3-212ENST00000548868 ZAP70P43403 619 aa13.66□□□□□ -0.22
SCRN3-212ENST00000548868 RILPL2Q969X0 211 aa13.66□□□□□ -0.22
SCRN3-212ENST00000548868 ZNF277Q9NRM2 450 aaPredicted RBP13.66□□□□□ -0.22
SCRN3-212ENST00000548868 SCN9AQ15858 1988 aa13.66□□□□□ -0.22
SCRN3-212ENST00000548868 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 MAST2Q6P0Q8 1798 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 GOLIM4O00461 696 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 IGSF3O75054 1194 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
SCRN3-212ENST00000548868 FAM205AQ6ZU69 1335 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 SALL1Q9NSC2 1324 aa13.65□□□□□ -0.22
SCRN3-212ENST00000548868 ECE2O60344 883 aa13.64□□□□□ -0.23
SCRN3-212ENST00000548868 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
SCRN3-212ENST00000548868 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
SCRN3-212ENST00000548868 DOK7Q18PE1 504 aa13.64□□□□□ -0.23
SCRN3-212ENST00000548868 LRRFIP1Q32MZ4 808 aaKnown RBP13.64□□□□□ -0.23
SCRN3-212ENST00000548868 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
SCRN3-212ENST00000548868 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
SCRN3-212ENST00000548868 KBTBD3Q8NAB2 608 aa13.64□□□□□ -0.23
SCRN3-212ENST00000548868 DBNDD1Q9H9R9 158 aa13.64□□□□□ -0.23
SCRN3-212ENST00000548868 YBX3P16989 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCRN3-212ENST00000548868 ARHGAP27Q6ZUM4 889 aa13.63□□□□□ -0.23
SCRN3-212ENST00000548868 NIM1KQ8IY84 436 aa13.63□□□□□ -0.23
SCRN3-212ENST00000548868 TBC1D22AQ8WUA7 517 aa13.63□□□□□ -0.23
SCRN3-212ENST00000548868 FSD1Q9BTV5 496 aa13.63□□□□□ -0.23
SCRN3-212ENST00000548868 NDUFB9Q9Y6M9 179 aa13.63□□□□□ -0.23
SCRN3-212ENST00000548868 COL4A5P29400 1685 aa13.63□□□□□ -0.23
SCRN3-212ENST00000548868 HIP1O00291 1037 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 CDC45O75419 566 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 CHAF1AQ13111 956 aaPredicted RBP13.62□□□□□ -0.23
SCRN3-212ENST00000548868 JDP2Q8WYK2 163 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 EDC3Q96F86 508 aaKnown RBP13.62□□□□□ -0.23
SCRN3-212ENST00000548868 ANTXR1Q9H6X2 564 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 GRIN3BO60391 1043 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 FKBP1AP62942 108 aaKnown RBP13.62□□□□□ -0.23
SCRN3-212ENST00000548868 RASSF7Q02833 373 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 GPR162Q16538 588 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 STRIP1Q5VSL9 837 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 SPTY2D1Q68D10 685 aaPredicted RBP13.62□□□□□ -0.23
SCRN3-212ENST00000548868 TTLL5Q6EMB2 1281 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 ZSCAN25Q6NSZ9 544 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
SCRN3-212ENST00000548868 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCRN3-212ENST00000548868 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
SCRN3-212ENST00000548868 ZNRF3Q9ULT6 936 aa13.62□□□□□ -0.23
SCRN3-212ENST00000548868 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
SCRN3-212ENST00000548868 ZFYP08048 801 aaPredicted RBP13.61□□□□□ -0.23
SCRN3-212ENST00000548868 LMNB1P20700 586 aa13.61□□□□□ -0.23
SCRN3-212ENST00000548868 GTF2IP78347 998 aa13.61□□□□□ -0.23
SCRN3-212ENST00000548868 MAP3K12Q12852 859 aa13.61□□□□□ -0.23
SCRN3-212ENST00000548868 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
SCRN3-212ENST00000548868 SUGT1Q9Y2Z0 365 aa13.61□□□□□ -0.23
SCRN3-212ENST00000548868 MYH2Q9UKX2 1941 aa13.6□□□□□ -0.23
SCRN3-212ENST00000548868 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
SCRN3-212ENST00000548868 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
SCRN3-212ENST00000548868 YDJCA8MPS7 323 aa13.6□□□□□ -0.23
SCRN3-212ENST00000548868 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
SCRN3-212ENST00000548868 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
SCRN3-212ENST00000548868 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
SCRN3-212ENST00000548868 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
SCRN3-212ENST00000548868 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
SCRN3-212ENST00000548868 CHMLP26374 656 aa13.59□□□□□ -0.23
SCRN3-212ENST00000548868 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
SCRN3-212ENST00000548868 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms