RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 PRIMPOLQ96LW4 560 aa16.43■□□□□ 0.22
CACNB3-209ENST00000548860 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
CACNB3-209ENST00000548860 USP32Q8NFA0 1604 aa16.43■□□□□ 0.22
CACNB3-209ENST00000548860 ADAMTS13Q76LX8 1427 aa16.43■□□□□ 0.22
CACNB3-209ENST00000548860 NDUFA8P51970 172 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 ST3GAL1Q11201 340 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 DENND2AQ9ULE3 1009 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 AKAP2Q9Y2D5 859 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 MTERF4Q7Z6M4 381 aaKnown RBP16.42■□□□□ 0.22
CACNB3-209ENST00000548860 TRMT44Q8IYL2 757 aaKnown RBP16.42■□□□□ 0.22
CACNB3-209ENST00000548860 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 TRIM22Q8IYM9 498 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 KIF18AQ8NI77 898 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 ARMT1Q9H993 441 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 ITGA6P23229 1130 aa16.42■□□□□ 0.22
CACNB3-209ENST00000548860 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
CACNB3-209ENST00000548860 ERBB3P21860 1342 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 CCDC144BQ3MJ40 725 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 PUS7LQ9H0K6 701 aaKnown RBP16.41■□□□□ 0.22
CACNB3-209ENST00000548860 BABAM1Q9NWV8 329 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 PCDHA7Q9UN72 937 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
CACNB3-209ENST00000548860 UBASH3AP57075 661 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 SCARF1Q14162 830 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
CACNB3-209ENST00000548860 TEX35Q5T0J7 233 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 NSUN7Q8NE18 718 aaKnown RBP16.41■□□□□ 0.22
CACNB3-209ENST00000548860 ZBTB43O43298 467 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 EEF2KMTQ96G04 330 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 KCNF1Q9H3M0 494 aa16.41■□□□□ 0.22
CACNB3-209ENST00000548860 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
CACNB3-209ENST00000548860 DPCR1Q3MIW9 517 aa16.4■□□□□ 0.22
CACNB3-209ENST00000548860 PLIN2Q99541 437 aa16.4■□□□□ 0.22
CACNB3-209ENST00000548860 MAST3O60307 1309 aa16.4■□□□□ 0.22
CACNB3-209ENST00000548860 IRS4O14654 1257 aaPredicted RBP16.4■□□□□ 0.22
CACNB3-209ENST00000548860 KARSQ15046 597 aaKnown RBP16.4■□□□□ 0.22
CACNB3-209ENST00000548860 KIAA1524Q8TCG1 905 aa16.4■□□□□ 0.22
CACNB3-209ENST00000548860 HAUS7Q99871 368 aa16.4■□□□□ 0.22
CACNB3-209ENST00000548860 MAPK8IP1Q9UQF2 711 aa16.4■□□□□ 0.22
CACNB3-209ENST00000548860 RIMBP3CA6NJZ7 1639 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 RIMBP3BA6NNM3 1639 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 RIMBP3Q9UFD9 1639 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 USP27XA6NNY8 438 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 FAM160A1Q05DH4 1040 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
CACNB3-209ENST00000548860 XPO4Q9C0E2 1151 aaKnown RBP16.39■□□□□ 0.21
CACNB3-209ENST00000548860 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 USP31Q70CQ4 1352 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 MBD4O95243 580 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 GOLPH3LQ9H4A5 285 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 PNOCQ13519 176 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 ELF2Q15723 593 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 JMYQ8N9B5 988 aa16.39■□□□□ 0.21
CACNB3-209ENST00000548860 ZNF202O95125 648 aa16.38■□□□□ 0.21
CACNB3-209ENST00000548860 SMIM5Q71RC9 77 aa16.38■□□□□ 0.21
CACNB3-209ENST00000548860 GREM2Q9H772 168 aa16.38■□□□□ 0.21
CACNB3-209ENST00000548860 CGNQ9P2M7 1197 aaKnown RBP16.38■□□□□ 0.21
CACNB3-209ENST00000548860 SLC4A4Q9Y6R1 1079 aa16.38■□□□□ 0.21
CACNB3-209ENST00000548860 UBXN4Q92575 508 aa16.38■□□□□ 0.21
CACNB3-209ENST00000548860 KIF20BQ96Q89 1820 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 UIMC1Q96RL1 719 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 ZNF215Q9UL58 517 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-209ENST00000548860 NBPF26B4DH59 902 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 ERCC3P19447 782 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 SSRP1Q08945 709 aaKnown RBP16.37■□□□□ 0.21
CACNB3-209ENST00000548860 NBPF14Q5TI25 921 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 NBPF10Q6P3W6 841 aaKnown RBP16.37■□□□□ 0.21
CACNB3-209ENST00000548860 NBPF15Q8N660 670 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 DHX58Q96C10 678 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
CACNB3-209ENST00000548860 RESTQ13127 1097 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 GRAMD1CQ8IYS0 662 aa16.37■□□□□ 0.21
CACNB3-209ENST00000548860 CCDC94Q9BW85 323 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-209ENST00000548860 MARCH6O60337 910 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 GNG11P61952 73 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 PDIA6Q15084 440 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 ZNF532Q9HCE3 1301 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 CTAGE5O15320 804 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 PHKA1P46020 1223 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 MAP3K12Q12852 859 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 ATP1A3P13637 1013 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 IL2RBP14784 551 aa16.36■□□□□ 0.21
CACNB3-209ENST00000548860 CYP7A1P22680 504 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
CACNB3-209ENST00000548860 BTG4Q9NY30 223 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 PRKAB2O43741 272 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 ATP2B2Q01814 1243 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 LONRF3Q496Y0 759 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 ANO1Q5XXA6 986 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 CCDC34Q96HJ3 373 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 CABP5Q9NP86 173 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 LZTFL1Q9NQ48 299 aa16.35■□□□□ 0.21
CACNB3-209ENST00000548860 HOOK1Q9UJC3 728 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms